Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00721 ATGACACTAGGCATAATACTTCATACCTTTCCTACTTCAATTTTGTTTTGTCTAGGCATTGCGGGATTGGCTGTGACATATGGACTTAATATAAATTCTCTACAAGTCAATTTAATCTGGTTTCTTTGCAATTTAGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAAGCTCCTCTTGTAATAAAAGACAACCAACCAGATCAATATTGGCCATCATTTGGAGAGGTTCATATCCAGGATTTACAGGTTCGGTATGCTCCTCACTTGCCTCTTGTTTTACGTGGTCTTACTTGCACTTTTACTGCTGTAGCAAACACTGGCATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTTCAAACACTTTTCCGAATTGTTGAACCTGTTGCTGGACAAATATTGATAGATAACGTTAACATCTCTTTGATTGGAATTCATGATTTACGGTCCAGATTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTAAGAAGCAACCTAGACCCACTGGAAGAGCACACTGATGAACATATTTGGGAGGTAATTTGGTTTTGCTTGACATTATGA 603 0.3798 MTLGIILHTFPTSILFCLGIAGLAVTYGLNINSLQVNLIWFLCNLENKIISVERILQYTSIPSEAPLVIKDNQPDQYWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAVANTGIVGRTGSGKSTLVQTLFRIVEPVAGQILIDNVNISLIGIHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEHTDEHIWEVIWFCLTL. 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00721 200 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 10 194 - -
Seca1g00721 200 Pfam ABC transporter 102 190 IPR003439 GO:0005524
Seca1g00721 200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 196 IPR027417 -
Seca1g00721 200 Gene3D - 67 197 IPR027417 -
Seca1g00721 200 FunFam ATP binding cassette subfamily C member 5 67 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00721 Seca-Chr1 9276099 9276840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00721 82 179 Calmodulin-binding Proteins AT2G36910 30.000 3.98e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00721 - K05666 gmx:100795627 318.931