Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00714 ATGGAGAGGGTTGCAGAGCCAAAGGTACTCCCTCGGACCTTGCCTGTCCTGGTTGAGGTATCTAGTCATTCCAATGCACACACAGCTGCAATTAGAGAAGCTGGTCAGAGGCTAATTGGGCAGGATGTTTCAAGTGTGCGTGGGATTTCAGTGAGAGATATGAATCAGTTTTCAAAAGCATGGGATGGCCCTATGACACGCCTGGCCTCCATTAGAGAAGTGGCTCAGTTGTCAAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTTGATACACGATCCTCTCAAGAACCGGTCTCCCCTGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTGCCAGAACCTGAAGACCTTATGTCTGATATTGAGACATTGAAGAGCAGCAAGGATTCTTTTGGGGACACTGGTTCTGGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATTTTGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAAACAAATCTGAGGCTGGATGCTTAATGAAGAGCATGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCCCACTAAGAAAACAAGCCTTGCTGTTCTTTCTCCAGCAGAAAGTCTGGTTGAAGAATCAAATGACATGGGGAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGACAACTCTTTCGTTCCCCTTGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTCAGTCCACATAGTAGTATTGATAGTACTAGTGTTGTAAGAACATTGAGCATTGCTAATAGTTGTGCAAGTACATATCGCAGTGATGCAATCACTAGTGATGGCATGCTTAGTTTAGACAGGAATTTTGATAGTACTAAAGGAAGTGTAAGGGGGGATTCACTTGAGAGTGCAAAAACTAGTGCCAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCAATCAGAGCACGGGATGGAAATTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGCTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGTTATTTTGCAATGAAAGTGATGGACAAAGCATCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACAGAAAGGGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACGTTGTATACACATTTCGAGACTGATAGATTCTCCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGACAACCTGGGAAACATTTCTCTGAGTACGCTGCACGCTTTTATGCTGCTGAGGTCCTGCTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATAGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTTGATCTCTCTCTTAGATGTGCTGTATCACCCACCCTTATCAGAACCTACGACAGTGACCCTTCTAAACGGGCTGGTGGTGCATTCTGTGTCCAACCAGCTTGCATTGAGCCTTCATCAGTATGCATCCAGCCTTCCTGTTTCATGCCGCGGCTCTTTCCTCAGAAAAATAAGAAGTCCTCAAGGAAGTCTAAGGCTGAACCTGGTCTTCCATCAGGCACACTTCCAGAGCTTGTTGCTGAGCCTACAACAGCGCGGTCTATGTCCTTTGTTGGCACACATGAATACCTTGCCCCTGAAATTATCAAAGGAGAGGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTGTTATATGGTAAAACCCCTTTCAAAGGATCAGGAAACCGCGCCACACTGTTCAATGTAGTTGGTCAGCAACTCAGATTTCCTGAATCACCAGCCACCAGTTATGCCAGCCGTGATCTGATCCGGGGGCTGCTGGTGAAGGAGCCACAACACCGGCTTGGGGTGAAGAGGGGTGCAACTGAGATCAAACAGCACCCTTTCTTTGAAGGTGTGAATTGGGCATTGATCAGGTGCAGCACACCACCAGAAATTCCAAGACCAGTTGAAAGTGAGCTACCAGCTAAGTTTGAAGCAGTTGATACTGTTGGGGTTGGCAGCAATAATAGTAAGAAGATGGCAGGTGGTAATGATATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 2295 0.4562 MERVAEPKVLPRTLPVLVEVSSHSNAHTAAIREAGQRLIGQDVSSVRGISVRDMNQFSKAWDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSSQEPVSPAPTRTWKGKASLPEPEDLMSDIETLKSSKDSFGDTGSGSFAGASHPPEPVDFDLMRTVYVPIGQNKSEAGCLMKSMSLKGPFLEDLSIRVPTKKTSLAVLSPAESLVEESNDMGNLSSPFSGARASQNTDNSFVPLDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTLSIANSCASTYRSDAITSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGNLGMSHFRLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTYDSDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFPQKNKKSSRKSKAEPGLPSGTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEIPRPVESELPAKFEAVDTVGVGSNNSKKMAGGNDMKSGGKYLDFEFF. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00714 764 SMART serkin_6 369 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g00714 764 MobiDBLite consensus disorder prediction 93 118 - -
Seca1g00714 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 490 502 IPR008271 GO:0004672|GO:0006468
Seca1g00714 764 MobiDBLite consensus disorder prediction 130 149 - -
Seca1g00714 764 MobiDBLite consensus disorder prediction 302 347 - -
Seca1g00714 764 MobiDBLite consensus disorder prediction 302 342 - -
Seca1g00714 764 Gene3D Transferase(Phosphotransferase) domain 1 453 522 - -
Seca1g00714 764 SUPERFAMILY Protein kinase-like (PK-like) 352 724 IPR011009 -
Seca1g00714 764 Gene3D Transferase(Phosphotransferase) domain 1 598 721 - -
Seca1g00714 764 CDD STKc_phototropin_like 367 721 - -
Seca1g00714 764 Gene3D Phosphorylase Kinase; domain 1 367 452 - -
Seca1g00714 764 ProSiteProfiles Protein kinase domain profile. 369 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g00714 764 PANTHER FLIPPASE KINASE 1-RELATED 129 725 - -
Seca1g00714 764 FunFam serine/threonine-protein kinase D6PK-like 453 520 - -
Seca1g00714 764 FunFam Serine/threonine-protein kinase D6PK-like 367 452 - -
Seca1g00714 764 MobiDBLite consensus disorder prediction 570 589 - -
Seca1g00714 764 MobiDBLite consensus disorder prediction 212 231 - -
Seca1g00714 764 FunFam serine/threonine-protein kinase D6PK-like 597 720 - -
Seca1g00714 764 Pfam Protein kinase domain 370 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g00714 764 Pfam Protein kinase domain 599 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00714 Seca-Chr1 9063646 9070021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00714 1 764 AGC Kinase Gene Family AT2G44830 67.048 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Seca1g00714 Pkinase 8.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00714 - - gmx:100800019 1328.54