Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00655 ATGAGCATGAGTAAGAAATCCATGGCAGAAGGTGAGCTCCAAGGAGCAAGGTGTGTCAAGAGACGACGAAATACTGGCAATGATATTGATAACCAAAATCAGAAGCTGTCACAGCAACAAGTTGGTCAAAATTCTGCAACCAATACTAACTCTACAAAGAGAAGCTCAAGATTTCGTGGAGTTAGCAGGCATAGATGGACTGGTCGATTTGAAGCACACTTGTGGGACAAGCTATCTTGGAACATAACACAAAAGTAG 258 0.4225 MSMSKKSMAEGELQGARCVKRRRNTGNDIDNQNQKLSQQQVGQNSATNTNSTKRSSRFRGVSRHRWTGRFEAHLWDKLSWNITQK. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00655 85 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 84 - -
Seca1g00655 85 MobiDBLite consensus disorder prediction 1 63 - -
Seca1g00655 85 Gene3D AP2/ERF domain 56 84 IPR036955 GO:0003700|GO:0006355
Seca1g00655 85 MobiDBLite consensus disorder prediction 29 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00655 Seca-Chr1 8124223 8124753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00655 53 81 AP2-EREBP Transcription Factor Family AT2G41710 79.310 1.92e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00655 - - gmx:100792612 115.931