Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00605 ATGACAGAAAAACTAGACAACAATTCATCCTTGGATGTGCCTTTACTATCTGATTGGAAGCACCATGAGCCAAGGCATACCATAGATGAAGAGAAAGTTATAGCCTCTCATCTTCCTACTAAAAATACCGTATCTTTCTTTCACACATGTCTTAATGGACTCAATGCAATATCAGGTGTTGGGATTCTTTCTGTTCCATATGCTCTAGCCTCTGGAGGGTGGTTAAGTTTAGCCCTTCTATTTTCTATTGCTGCTATAGCATTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTCAAACATTAGAACCTATCCTGATATAGGTGAACTTGCATTTGGAATGACAGGGAGACTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTGTCAATAGGGTTCTTAATTCTAGAAGGGGACAACTTGAGCAACTTATTCCCCATTGAGGAGCTTCATGTGGCTGGTTTAGCAATTGGTGGAAAGCAATTATTTGTGATATTTGTTGCTCTTATTATCTTGCCTACTGTTTGGTTGGATAACTTGAGTCTACTTTCTTATATATCTGCAAGTGGTGTGTTTGCTTCAGCTATTATCATCTTGTCAATATCATGGACTGGATCAGTTGATGGAGTTGGTTTTCACCAAAAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACAGCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCCACCCTATACAATTCCATGAGAAACAAACACCAGTTCTCTAATGTACTATTTGTATGCTTTGTGATAACCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACTTAATGTTTGGTCCAGAAGTTGAGTCACAGGTAACTTTAAACCTTCCACTAAACAAAATAAGCTCAAAAATAGCAATATATACTACCTTGGTCAACCCCATATCCAAGTATGCTCTGATGACAACTCCAATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTGACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGTATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAAATTTCAGGATCTTACATGAAATTTGGGTTTGAGACTGTAGTCATAGTGGTAATAATAGTGGCAGCTATAGCGATGGGAATATCTGGGACATACATATCCGTCAGTGAAATAGTCCAACATTGGTAG 1299 0.3872 MTEKLDNNSSLDVPLLSDWKHHEPRHTIDEEKVIASHLPTKNTVSFFHTCLNGLNAISGVGILSVPYALASGGWLSLALLFSIAAIAFYSGLLMKRCMDKNSNIRTYPDIGELAFGMTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELHVAGLAIGGKQLFVIFVALIILPTVWLDNLSLLSYISASGVFASAIIILSISWTGSVDGVGFHQKGTLVNWSGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLFVCFVITTVGYASMAIIGYLMFGPEVESQVTLNLPLNKISSKIAIYTTLVNPISKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGYLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVVIIVAAIAMGISGTYISVSEIVQHW. 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00605 432 PANTHER OS05G0424000 PROTEIN-RELATED 52 415 - -
Seca1g00605 432 Pfam Transmembrane amino acid transporter protein 43 422 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00605 Seca-Chr1 7257601 7260064 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00605 22 429 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.680 4.30e-174 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00605 K15015 - gmx:100794374 690.263