Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00603 ATGTCAGAAAAACTTTTCAACAATTCATCCTTGGGTGTGCCTTTACTACCCGAGTGTAAGCACTCTGTTCTAGGACATTCCATAGATGAGGAGAAAGTTATAGCCTCTCATCCTCACACCAAGAATACCGTATCTTTCTCTCGCACATGTTTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTAGCATCTGGAGGATGGTTAAGCTTAGTTCTTCTATTTGCTATTGCTGTTGTAGCATTTTACTCAGGATTGTTGATGAAAAGATGTATGGATAAGAATTCAGACATTAGAACCTACCCTGATGTAGGTGAGCTTGCATTTGGAAAGATAGGAAGGCTAATAGTATCAGTATCTATGTACACAGAACTCTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGCAACTTATTCCCCATTGAGGAGCTTCAAGTGGTTGGTGGTTTTGCAATTAGTGGAAAGCAATTCTTTGTGATATTAGTTGCTCTTATAATTTTGCCTACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCTGCAAGTGGTGTCCTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGCATCAATTGATGAAGTTGATTTTCACCAAAAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACATCAGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCTGTCTTCCCAACTCTGTACAATTCTATGAGAAACAAACATCAATTCTCTAATGTCTTACTTGTGTGCTTTTTATTAGCCACCATTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGATGTTGAATCACAGGTAACATTAAACCTGCCACTAAACAAAATAAGTTCAAGAATAGCAATATATACTACCTTGGTTAATCCCATAACCAAGTATGCTTTGATGACAACACCTATTACCAATGCTTTGAATGATTTGCTTCCAAGGACATACAAGAACAGAGTGACCAACATCTTAGTCAGCACTGTATTGGTAATCAGCACTGTCATTGTTGCCCTGGTAGTTCCTTTCTTTGGGGATCTAATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGATCTTACATGAAATTTGGGTTTGAGACTGTAGTCATAGTGGCAATAATAGTAGCAGCTATAGGAATGGGAATATCTGGGACATACACCTCTGTCACTGACATAGTCCACAGTTTGTAA 1302 0.3894 MSEKLFNNSSLGVPLLPECKHSVLGHSIDEEKVIASHPHTKNTVSFSRTCFNGLNAISGVGILSVPYALASGGWLSLVLLFAIAVVAFYSGLLMKRCMDKNSDIRTYPDVGELAFGKIGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEELQVVGGFAISGKQFFVILVALIILPTVWLDNLSLLSYVSASGVLASAIIILSISWTASIDEVDFHQKGTLVNWSGIPTSVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFLLATIGYASMAIIGYLMFGPDVESQVTLNLPLNKISSRIAIYTTLVNPITKYALMTTPITNALNDLLPRTYKNRVTNILVSTVLVISTVIVALVVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGSYMKFGFETVVIVAIIVAAIGMGISGTYTSVTDIVHSL. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00603 433 Pfam Transmembrane amino acid transporter protein 43 421 IPR013057 -
Seca1g00603 433 PANTHER OS05G0424000 PROTEIN-RELATED 52 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00603 Seca-Chr1 7235701 7237829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00603 45 433 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.000 1.63e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00603 K15015 - gmx:100794374 666.766