Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00451 ATGTCTGGAAAGGATGAAAACCAAGATTTGCAGAAGCAGATTGGGTGCATCACTGGGTTTTTTCAGTTCTTTGATCGACACCGTTTCCTCACAACCCAACGCACTAATGGCTACATTCAACACACAACTACTTCAGGTGGAAGCAATAATGACATCAAAGAACTCAATAGTAAGACAAAGAATCTGAAGAATGCAAGAGAGAAGCAACAATTCTCCACAGAGTCATCAATAACTTCTTTGTCTTCATCATCTTGTTCATCTAGCATGTCATCCCTTGACTTTAACAAAACAATGCAGACAGAATCACCATCAACCAGTCAAATCAGACTTCCACAAAATCCACACTCAGAAGTAGCAAAGAAGCAACATGATAAACCAAGCCAGCACTCCCTTGACATGTATGATATTGTCAAAGACTCAATGCAGAGAGAGACTAAAGGATTGTCTGTGAATACTATGGCTAAAGAGGGAAAGAAGGGTCACACTCATACCTTGAAACACATAGATTCTCCCAGGCCTTTGTGGTCCCAAAAATCTGTCAATGCAGGAGTTATGATTGCCAATGAACCATTACATATTCTTTCAAAGTCCAAGAGAAAACCTTGGGACTCACCAAGACTCTCTTATGATGGAAGGGTCACACAAGACACATTCAAATCCACCACAAAGCATAAGGAACTCCCAAGGCTTTCCTTGGACAGCAGACAAGGATCCATTAGAGGTTTCAATGAAGGAAACAAAGCTGGAAACTTGTTGAAGGGTCCACAAAAAGGGTATGGAAGGAATTCCAGCATAATGATTAACCAGCTGCAAGAACCAGAAACTTCAAAAAGATCATCCAGTGTTGTAGCCAAGTTGATGGGACTGGAAGCCCTCCCAGAATGTACACAAACTTGTAGCACTCCAATGGGGACTTCTAGCTTTTCCACCAATAAAATTGAACTCTTGGCAAGATCTGGCACTAGTGATGAACACAAGCAACACCAAAGTGTTGCATCCCCAAGGACAAGCCAAGGAATCACCTTGCCTCAGTCTAGAAGGGCTGATTCAATCACAAATGTGACACCATATTCAAGATTTGCACTAGAACCAACTCCATGGAGGCAACCTGAAGCAAGGCAAAGTTCTCAATTACAAGCTTCCAAGGGAAGTGAATCTGATGTAAAAACCCCCAAGTCATCTCTCTCTGTATATGGGGAAATTGAGAAAAGGCTAGCAGATCTTGAGTTCAAAAAGTCTGGAAAGGATCTAAGGGCCCTCAAACAGATTCTTGATGCAATGCAGAGATACAATGATCCATTAGATACTGCAAGAGATCAAGCTTCAAATTCACCATCTGACACTAGGAATAATACTAGTCTCAGTGAAGGCTCAAAAGTACAAAGTCCAAGAATACCACAAAAGGTCCCAGCATCTGTCACTGTTGAAATGCCAAATTCAACCCGGGGTAGTAAATTGCCAATTGTCATCATGAAACAAGAAAAAGTTACTAGAAAAACCAACAACAATCCTTCTTCCACAGAAATGTCAATTCATGGTAAATCTGGTCTCAGCAAGTCTTCCCCTAGTAATCTCACAAATGGAAGATTGGTTGACAAGCAAAAAGCTAAAGCTATCAGTTCCACAACAAAAAATATCAAGGACCCTTTTGGTCAACCAGTTCGTTCAGCTGATAAGAATAATAACTTGAGAAGTTCAAAATTGATGCAATCCATGAAAGTTCAACAAGACAGCAATGGAGAAAACACCACCAACTGTGGTAATGTAACAGTGACTGGGAGCCCAAGACTGCAAAAGAAGTTTGGTTTGGAGAGGCGTTCTCCACCAACTAGTCCATCATCAGATTCCAGTGTCAACAGAAGACAACATAATAGGAAACTTGTGGAATTGTCTTCCCCAAGTACAACACCTAGACAAAATTTCTCTTCTTTGCAGGAAAGAAATGAATGTTTCAGTGAGATCAGCTTTCAGAGGAGGGATTTTAAGCATCATGTTAATGTCATTTCTCCAGACTTTGAGAGCAAAAGAAGCTTGGCTGATCATAGTGACATTGAAGTCATTCGCTTTGATCAATTAGGAAATATCAATAGCACTTCTATCCAATTGAGTGGCCTGAATCAAAATAATGCATTTGAAGAGTTGAGGAAGGAAAGCTCTAAGGCTGAGACAATAGTCACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTTTATAGGGAAGACCCTCCATCTCCAGTGAAAAAGAAATCAGACATCTCAAAAAATTTAGGTGAAGGTATAAGCATTGATGAAGATAGTGATAGAGACATGAACACCCAGAATTTGATTCAAATACTTCAAGAAATTGACTGGATAGATGAGAAATTCATCAATTTCACTAACAGCATGGATCCTGACCATAAGTATATATCAGAAATACTGTTAGCATCAGGTCTGTTCAGTGGTCACAGCTCTAGCCAGATACTTCATTCACCAGGTTACTTGATTAACCCAAAGTTGTTCTATGCGCTTGAACAAATGAAGACAAATAAGAGGCATTTCAATGTTGAAGACAGTTCCCAGAAAATTGCTAGGATTGTTAATCCTGAGCAAATTCAAAGGAAGCTCATATTTGATGTTGTTAATGACATTTTAGTTCAAAGACTGATATTGGAGAGCTCTTCCACACTGTGGTGCCTACCAAATGAGCTAACAGGCAGAAAACTGAAAGGGAAGAAGCTTTTGGATGAGCTATGTACAGAAATAGATCAGTTACAACCTCAAAATAGGAATTTCAGCCTAGTTGGTGAGGATGAAGATTTGACAAGTCTCTTGTGCAGAGATTTGAAGCATCACCACACAATTTGGACTAACTGCTGCATTGAGATACCAAATCTTGTGTTGGATATTGAACGGTTGATCTTTAAAGATTTGATAACTGAAGTTGTGACAAGTGAAGTAGAAAACCATCCTGATAGGCATTGCAGGCAACTACTGTTTCCCAAGTAG 2997 0.3997 MSGKDENQDLQKQIGCITGFFQFFDRHRFLTTQRTNGYIQHTTTSGGSNNDIKELNSKTKNLKNAREKQQFSTESSITSLSSSSCSSSMSSLDFNKTMQTESPSTSQIRLPQNPHSEVAKKQHDKPSQHSLDMYDIVKDSMQRETKGLSVNTMAKEGKKGHTHTLKHIDSPRPLWSQKSVNAGVMIANEPLHILSKSKRKPWDSPRLSYDGRVTQDTFKSTTKHKELPRLSLDSRQGSIRGFNEGNKAGNLLKGPQKGYGRNSSIMINQLQEPETSKRSSSVVAKLMGLEALPECTQTCSTPMGTSSFSTNKIELLARSGTSDEHKQHQSVASPRTSQGITLPQSRRADSITNVTPYSRFALEPTPWRQPEARQSSQLQASKGSESDVKTPKSSLSVYGEIEKRLADLEFKKSGKDLRALKQILDAMQRYNDPLDTARDQASNSPSDTRNNTSLSEGSKVQSPRIPQKVPASVTVEMPNSTRGSKLPIVIMKQEKVTRKTNNNPSSTEMSIHGKSGLSKSSPSNLTNGRLVDKQKAKAISSTTKNIKDPFGQPVRSADKNNNLRSSKLMQSMKVQQDSNGENTTNCGNVTVTGSPRLQKKFGLERRSPPTSPSSDSSVNRRQHNRKLVELSSPSTTPRQNFSSLQERNECFSEISFQRRDFKHHVNVISPDFESKRSLADHSDIEVIRFDQLGNINSTSIQLSGLNQNNAFEELRKESSKAETIVTAEQPSPVSVLDAAFYREDPPSPVKKKSDISKNLGEGISIDEDSDRDMNTQNLIQILQEIDWIDEKFINFTNSMDPDHKYISEILLASGLFSGHSSSQILHSPGYLINPKLFYALEQMKTNKRHFNVEDSSQKIARIVNPEQIQRKLIFDVVNDILVQRLILESSSTLWCLPNELTGRKLKGKKLLDELCTEIDQLQPQNRNFSLVGEDEDLTSLLCRDLKHHHTIWTNCCIEIPNLVLDIERLIFKDLITEVVTSEVENHPDRHCRQLLFPK. 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00451 998 MobiDBLite consensus disorder prediction 68 113 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 628 644 - -
Seca1g00451 998 Pfam Domain of unknown function (DUF4378) 802 977 IPR025486 -
Seca1g00451 998 MobiDBLite consensus disorder prediction 435 481 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 319 394 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 331 359 - -
Seca1g00451 998 PANTHER LONGIFOLIA PROTEIN 4 994 IPR033334 GO:0051513
Seca1g00451 998 MobiDBLite consensus disorder prediction 495 595 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 220 260 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 435 644 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 369 393 - -
Seca1g00451 998 MobiDBLite consensus disorder prediction 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00451 Seca-Chr1 5119375 5123991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00451 127 983 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.953 6.03e-87 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00451 - - gmx:100808151 1351.27