Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00432 ATGGGTTTCTTGGCTCCTGAGGTTTTCTTGGATACCTGTGTCGGCTGGACAGATCGATACGACGTTTACTCCTTTGGAATGGTTCTATTAGAAGTGATATGTGCAAAGCCATGTTGGGATATTATAGAGGAGATGATGGGTCCTGGTGCTAAGATACAGATCTCAAGTGACGACGAATCAGAAAGTTTTCGTCATTATGTCATTTCAAGGCTTCGAGCTGAGGAGATTATTGATCCGGCTCTCACAGGAAAAATTGCACCAGAATGTAAGGAAGTATTCATAGATATCATAGTCGACTGCCTCAAGTATGAACCAAATGAACGGCCAACAATGGGTGAAGTGGAGATGGAACTTGAGCGTGCTCTTACTTTGCAACTGGAAGCAGACGCCAGGAATACTAGTGGCCATCATTATAGCTTATCATCCACCACCATTACTCAACAACAAGAGGCGCCAATTGCAGTCTAA 468 0.438 MGFLAPEVFLDTCVGWTDRYDVYSFGMVLLEVICAKPCWDIIEEMMGPGAKIQISSDDESESFRHYVISRLRAEEIIDPALTGKIAPECKEVFIDIIVDCLKYEPNERPTMGEVEMELERALTLQLEADARNTSGHHYSLSSTTITQQQEAPIAV. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00432 155 Pfam Protein tyrosine and serine/threonine kinase 3 117 IPR001245 GO:0004672|GO:0006468
Seca1g00432 155 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca1g00432 155 MobiDBLite consensus disorder prediction 135 155 - -
Seca1g00432 155 SUPERFAMILY Protein kinase-like (PK-like) 2 120 IPR011009 -
Seca1g00432 155 PANTHER OS07G0166700 PROTEIN 2 125 IPR045272 GO:0004714|GO:0006468
Seca1g00432 155 Gene3D Transferase(Phosphotransferase) domain 1 1 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00432 Seca-Chr1 4934162 4934629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00432 1 129 Receptor kinase-like Gene Family AT3G51550 37.209 1.00e-17 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca1g00432 PK_Tyr_Ser-Thr 1.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00432 - - lja:Lj1g3v3029330.1 144.821