Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00429 ATGAACAACTTCCAACAATATCGTCACATTGCTTCACCTGGCTGGACACTAGGATGGACATGGGCAAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTTCCACATTGCTGTAAAAAGGACCCAACAGTTGTAGATTTACTTCCTGGAACTCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGGGTGCTAAGCTCATGGGCGCAGGATCCAACCAATGCAGTATCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAGAACTGTCAAAGTCCCCAAAAACTTCACCTTGAAAGCACCAGGACCGGTGACATGGAATGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACCTGCTGTGTTTCTCTCTCCTCTTTCTATAATGATACCATTGTACCCTGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCAGGGAGCTGTGTAAATGCAGATACGCCACATCTGGCATCAGTTGTTTCTGGCGTCGGAAAGAATAATTTGGCACCTTTGGTTCAATGTACTAGTCACATGTGCCCTATCCGAATCCACTGGCATGTTAAGCTTAACTACAAGGAGTATTGGCGTGTGAAGGTTACTATTACTAATTTTAATTTCCGTATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCAAACTTCGACAATCTGACTCAGCTATTCAGTTTCAACTACAAGTCATTAACTCCTTACGGTTCAATAAATGACACAGCAATGCTTTGGGGAGTCAAGTTCTACAATGATTTTCTCAATCAAGCTGGCCCTAATGGTAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGACAAGGGCTGGGCTTTTCCTAGGAGGATCTACTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCAAGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATGACCTCTTTGGTAGCCTTGTTATTTTATGCATATGCATAA 1092 0.4277 MNNFQQYRHIASPGWTLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGRAGTTNRTVKVPKNFTLKAPGPVTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCACGCQSNSSQSGSCVNADTPHLASVVSGVGKNNLAPLVQCTSHMCPIRIHWHVKLNYKEYWRVKVTITNFNFRMNYSEWNLVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVMTSLVALLFYAYA. 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00429 363 PIRSF COBRA 1 122 IPR006918 GO:0010215|GO:0016020
Seca1g00429 363 PIRSF COBRA 121 363 IPR006918 GO:0010215|GO:0016020
Seca1g00429 363 PANTHER PROTEIN COBRA 122 353 IPR006918 GO:0010215|GO:0016020
Seca1g00429 363 Pfam COBRA-like protein 1 121 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00429 Seca-Chr1 4888759 4892983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00429 1 348 COBRA Gene Family AT5G60920 73.740 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00429 - - gmx:100783820 714.146