Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00428 ATGAGGCTTGTCATATCAGTTCTCTGTGTTATTGTGCTATTTTCATATGCAGCTGCATATGATCCTTTAGATCCCAATGGAAACATAACGATCAAATGGGATGTTGTGTCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTACCGGCATATCATGAATCCAGGATGGACCTTGGGATGGTCATGGGCTAAGAAAGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAGCAAGGAGACTGTTCTAAGTTCAAAGGCAATGTGCCTCATTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTACCTTACAATCAACAATTCTCAAACTGCTGTAAAGGTGGAGTGGTGGCAGCATGGGGCCAAGATCCTTCATCAGCTGTCTCATCCTTCCAAGTGAGTGTTGGACAAGGTGGTACTTCAAACAAGACAGTTAAACTCCCCAAAAACTTCACTCTCCTGGCTCCAGGACCAGGCTATACTTGTGGTCCTGCCAAGGTTGTTCCTTCCACTGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTGGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTGTCATCCTTCTACAATGAGACCATTACCCCTTGTCCCACTTGTGCCTGTGGCTGCCAGAACAAGAAGAATTATGTTGGTATGGTATGCAGGAGTGACTCCAAATTTCTCAGCACAGTGGGGATCCACACTCCAAAGAAAGAAAATGAACAACTACTACAGTGTACTCATCACATGTGCCCCATCAGGGTACACTGGCATGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGATTGCCGTGACAAATTTCAATTACAAGATGAATTACTCTCTCTGGACTCTAGCAGTTCAGCATCCAAATCTTAACAATGTCACTGAAGTTTTCAGCTTTGATTACAAGCCTTTGGTTCCCTATGAGTCCGTGAATGACACTGGTATGTTCTATGGCATGAAATACTTCAATGATCTCCTAATGGAAGCTGGACCAAGTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAAGATACATTCACATTCAAGCAAGGATGGGCATTTCCTCGCAAGGTTTACTTTAATGGTGAAGAATGCTTGATGCCTCCACCAGATACCTATCCAATCCTCCCAAATTCTGCCCTTGTAAACCTACATAACTTCCCAGTATTCATCTTCTCAATGCTTGTCTTTCTAGCTATTTGGTGA 1308 0.4365 MRLVISVLCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAVSSFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCPTCACGCQNKKNYVGMVCRSDSKFLSTVGIHTPKKENEQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYKMNYSLWTLAVQHPNLNNVTEVFSFDYKPLVPYESVNDTGMFYGMKYFNDLLMEAGPSGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGEECLMPPPDTYPILPNSALVNLHNFPVFIFSMLVFLAIW. 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00428 435 PIRSF COBRA 1 435 IPR006918 GO:0010215|GO:0016020
Seca1g00428 435 PANTHER PROTEIN COBRA 6 427 IPR006918 GO:0010215|GO:0016020
Seca1g00428 435 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00428 Seca-Chr1 4886040 4888972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00428 1 434 COBRA Gene Family AT3G29810 63.431 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00428 - - gmx:100783410 850.892