Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00416 ATGAATGACTCAATGGGTGATCAAGACAATGTGAATGTCGAGAACAATGCAACAGAGGGATGCGGAGGAATTTCAAGCAGTAATGGTCTGAATGGTAATCCTGTTGATGATGAAGAAGGACGTGTTGATGGTGACGGGCTTGACTTTGTTGGCTTAAGCATTGAACAGTTTAAAAAGTACCACTTTAGGAGTCGTCTGGTGGCATTTCAATTCTATAATTCATATGCTCGAAAAAGGGGATTTGCTGGTCGCAGATGGAATGTTTTGAAAATCAAAAGACGAGAAGTCACCCAGCAGGAATTTGTGTGTTTTAAGGAGGGATTTCGTGACAAGAAACACTTAAAAAGGGAAGGTCGAAAGCGAGAGCCTAGAGCAATGACAAGGACTGGGCTTCAGAGAGCGTCGAAGTTAAAGCTGTTGTCGTTTATGGAAACACCTGCATCCGTGGTATATATAATAGGAAAAGGAGTATCTAATAAACCTGAAACCAAAGTACTGGTAAGTGGATAA 510 0.4137 MNDSMGDQDNVNVENNATEGCGGISSSNGLNGNPVDDEEGRVDGDGLDFVGLSIEQFKKYHFRSRLVAFQFYNSYARKRGFAGRRWNVLKIKRREVTQQEFVCFKEGFRDKKHLKREGRKREPRAMTRTGLQRASKLKLLSFMETPASVVYIIGKGVSNKPETKVLVSG. 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00416 169 MobiDBLite consensus disorder prediction 1 33 - -
Seca1g00416 169 MobiDBLite consensus disorder prediction 1 38 - -
Seca1g00416 169 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 131 - -
Seca1g00416 169 Pfam FAR1 DNA-binding domain 70 132 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00416 Seca-Chr1 4704831 4706723 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca1g00416 FAR1 6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00416 - - tpra:123915148 85.1149