Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00311 ATGCTCCAATTCAACAAAAAGGAGAAGTTGTTCAATCTAAAAGGCATTGCTCTTGGCAACCCAGTTCTAGAATTTGCAACAGATTTCAATTCTAGAGCTGAGTTCTTCTGGTCTCATGGATTAATCTCAGACTTAACGTACAAAATGTTCACTTCTGTTTGTAACTATTCAAGATATGTGAGGGAATACTATAGTGGCTCTGTTTCTCCTATCTGTTCAAGTGTTATGAGCCAAGTTAGTACAGAAACTAGTAGATTTGTTGACAAGTATGATGTGACCCTTGATGTTTGTATATCTTCAGTGTTTGCACAAACCAAAGTCCTCAATCCCCAGCAAGTTACTGAAACGATAGATGTATGTGTGGAAGATGAAACAGTCAATTATCTGAATAGGAAAGATGTTCAATCAGCTTTACATGCACGTTTGGTTGGGGTACAAAGATGGTCTGCTTGCAGCAATGTCCTTGATTATGAGCTACGTGACTTGGAGATACCAACAATCACGGTTGTAGGCAAGCTAGTCAAGGCAGGAATACCAGTATTGGTCTACAGTGGTGATCAGGATTCAGTTATCCCATTGACTGGAAGCAGGACATTAGTACATCAATTGGCAAAAGAACTAAGATTGAAGACTACTGTGCCATATAGGGTCTGGTTTGAGGGGCAGCAGGTTGGTGGTTGGACTCAAGTTTATGGTGACATCCTTTCATTTGCCACCATTAGGGGAGCATCACATGAAGCTCCATTTTCACAACCTGAGAGATCACTTGTGCTGTTCAAGTCCTTCTTAGAAGGCCAAGCTCTACCAGAAGAATTTTGA 819 0.4078 MLQFNKKEKLFNLKGIALGNPVLEFATDFNSRAEFFWSHGLISDLTYKMFTSVCNYSRYVREYYSGSVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFAQTKVLNPQQVTETIDVCVEDETVNYLNRKDVQSALHARLVGVQRWSACSNVLDYELRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVHQLAKELRLKTTVPYRVWFEGQQVGGWTQVYGDILSFATIRGASHEAPFSQPERSLVLFKSFLEGQALPEEF. 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00311 272 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 9 252 IPR001563 GO:0004185|GO:0006508
Seca1g00311 272 ProSitePatterns Serine carboxypeptidases, histidine active site. 235 252 IPR033124 GO:0004185
Seca1g00311 272 Gene3D alpha/beta hydrolase 1 271 IPR029058 -
Seca1g00311 272 FunFam Carboxypeptidase 166 265 - -
Seca1g00311 272 SUPERFAMILY alpha/beta-Hydrolases 6 268 IPR029058 -
Seca1g00311 272 Pfam Serine carboxypeptidase 5 265 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00311 Seca-Chr1 3408215 3410364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00311 128 268 Calmodulin-binding Proteins AT2G22960 26.950 2.01e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00311 K16297 - gmx:100805130 513.457