Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00304 ATGACCATGGTTCCTTCTGAAAGCGGCAAACAAAAGAGGAGTACTAGTGATTATGTGTTTTACAGTGCTATGAACCAAGTCGGTTACAATTGTTTAGGATCTGAATTTTTGGTAACGAGGCACAACATGGCTCAGCCTCAACAACAAATAGATTCATCCACACCCACCACCAACACTAATACTAATTCCAATAACCAACTAGAACAACCCGAACCCGAACCCGAACCCGAACCTGAAGCTGGTTCCACATCAAAGGAAGAAGAAGAAGAAGGAAGAAACAACAATAACAACTGGCTTCAATTAAGCATAGGTTTTAATAATCAGAGTCACACAACAACAAGGACCAACAACAACAACAATCACAACCGAATCGGTTCATCAAGCGGTTCAGGGCTGGTGGAGCTTGAGCTGTTACCGGGTGGTGCGCAGCGTCATTCTAATTGGGCCTCTTCTTCAAGGCCCAGTTTAGAGGCACCGGCGGTTATTTTTCCAGCGAGAGGGTCTTCTTTGGTTTTTGAACAAACGACGTCGTCTTGTTGTTCTTCTTCGATGGCGCCAAGTGGTCCAACATTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTTTTACCTCATTCTATTCCTTCTTTTACGACGTCGTCTTCAATAATCTCACAATCTTTGAGGCCTCCTTTAGCAATATCTAATTATAATTATCCACCTATTCTCCCTCCCTTTCATCATCATCAATTTGACGTGGCCGGAACAAGCTCTGATGTTACCGTTCGAGTTGTTGATCCTCCTCGGAGACCTCATTCTGGAATATGGTTTATGCTACAAGCCTCACAAAACCAAGGGAAAGAACCGTTTTTGCCTCAAATACCTAAGAACTACCTTAGAATCAAAGATGGAAGGATGACAGTTCGGTTGCTATTGAAGTATTTGGTTAGCAAACTCAAACTTGAGAGCGAATCAGAGATAGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGACACAAAGGGACATTACCACAACAACTTTGCTTTCAGATTCCTCAACCACAGATCATGTTATGGTGCTCCATTACGGTAGAAGCACTTCTTAA 1128 0.43 MTMVPSESGKQKRSTSDYVFYSAMNQVGYNCLGSEFLVTRHNMAQPQQQIDSSTPTTNTNTNSNNQLEQPEPEPEPEPEAGSTSKEEEEEGRNNNNNWLQLSIGFNNQSHTTTRTNNNNNHNRIGSSSGSGLVELELLPGGAQRHSNWASSSRPSLEAPAVIFPARGSSLVFEQTTSSCCSSSMAPSGPTFGHQEMMNWAFGPLLPHSIPSFTTSSSIISQSLRPPLAISNYNYPPILPPFHHHQFDVAGTSSDVTVRVVDPPRRPHSGIWFMLQASQNQGKEPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLESESEIEITCRGQQLLPFLTLQHVRDNIWTQRDITTTTLLSDSSTTDHVMVLHYGRSTS. 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00304 375 MobiDBLite consensus disorder prediction 44 70 - -
Seca1g00304 375 MobiDBLite consensus disorder prediction 78 93 - -
Seca1g00304 375 Gene3D - 262 370 - -
Seca1g00304 375 PANTHER RING FINGER PROTEIN 9 373 IPR044171 GO:0007275
Seca1g00304 375 MobiDBLite consensus disorder prediction 44 130 - -
Seca1g00304 375 MobiDBLite consensus disorder prediction 94 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00304 Seca-Chr1 3344278 3353090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00304 283 371 C3H Transcription Factor Family AT3G23060 38.947 2.91e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00304 - - lja:Lj1g3v3138970.1 317.005