Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00261 ATGGAGTCCAAACATCAAACACCAAGTGTAATTTTAGAATTGATGGGACTTGATAAAGTGCCTCCCCAACATCCTGTTAGAGATAAACAGAAAGTGCTCTCTGGGAATTATCTGCAGAAAATTGCTTCTATTGGTGTTAGAAAGAAGCGATCATCTCACCAGCATCATTCCTTAGGAATGAGTACTGATGAAAAGGAAGAATCTGATGATGTTTCAAAAGTGGTCAAAACAATAAGGAGAAATAAGCACCATAACCCGTCGAATGGAAATGGGAAAGAGAACCCATATTTGTCCGGAACAAAGGTAAATGGTGTGCCACAACAGTTGTTGGATGCTTCAGTCAGGTGGAAGCCTGAAACCTTGGTTGATACCATTAGTCCATTCAATCTTGAAACAAGTGTGAATTCAGGGAGAATAGCTGAGCAGGGAAGTCTGCCACTTGAACAGAAAATGAATAATGGGTTGCAAAATGACATGCATGGAGAAGCTGGATTGTATGAAACATTTAGGCTTTCAAAATCTCAATTGGATCTGAAGGATGAAACTTTCGAATCAAGAATTACTGTTTTGAAAGCGAATCCTGAAAAGAGAGAAAATAGTTTAAAATATTTTTCATTTCCTAGTTCTTGCAGAAATCCTCATTTGGCTGATGGGCTGCTCAAAGAGATATTTTGTCCTAAAAGTACGAGAGTATATCCTGAAATGAGAGTTAGAAAGAAAATGTCCTATCACATGAAATTTGGTAAGCAGTGTTCAAGATCTTTTAGTAAAACTTCAGAGGAGGTTTCTGTGCAAAGGGGAAGTATTGCAAACAAAGTTTCAGATACCGTTTCAAGTTCAGTTTTTAGAGGGAATGAAGCATTTACCAAAAGTTCTGATATGCTGGATCCTGTTTCAGTTAATGAGATCCAATTGCAAAAAGTTGGAAATGGAGCAAGGAATTTGAGTTATCAAAGTGGTTTTAGCAATGATAAAAATAGAAGGAACATTGGATGTAAGGTTGGTTTGAATTATAGCTTTGCCAGAAAAGTGCCAATGGCCAGACCTCTTTATACGGCTTCTGTTATTGCTGATAAATGTGAAACTATGACCAGGGACAACTTGTTTCAGAAATATTGGGGTTTGAGGAAGAATGAATCTGCAAATTGGTCAACCCAGAAGTCAAAGAATCAAGATATTAATCAGCAAGATTATTCAGAAGATTTGCACCTCAGGTCCAGCAGTGAGAAATCCCCTTCTTTTTCCACTTATTTTATTAGTAATCATACTGAAGAGGATTGTATTGGCCCTAATAAGTTGAAGAAGAGATGTTATGGGAATGATTTCTCTGCTGACAAACCTATGCTTCCTCATTTGTCAAGCTCTGGTCCTTCTCCTGCCTTCATAGACAGTCATATCTTGCAAGAGACACGCTTAACGAACAATGAAGTGAAGAACAATAAGCATGAAGACAGTAATATGTCCAAGCAAAGTGTTGTGTCTCCTGATTCATTAGTTGATTGCTTGGTGTCTGATGCAAAGACTCAGGTTGTTGGCTGGTCACCTAATAATCCAACCAAGCAGCAATCTGAATCAACAGCCTTCATTTTGACACATGGGGACAACGATTCTTTGAGTGATACTTTTTCTGCTTCAACACAACAGGATACATCAGAATTTCAAGAAGACTCACTTTGCTCTGGGGCTGACAAAGATTCCCTTGGTAGTTTTGAGGAGGCATACGAACCTAGTCCAATTTCAGTTTTGAATCCCTCATTTAGAGAAGACAATTCATTTAGCTCTGAATGTGGTGCTGGTGTATATGATTCCTCTGAAGTGGATGATGAAGGACTTGATTTGAATGTTTCAAGTGATGAAGATTGTGGGAATGAATCTATAGGGGGTGACTTTGAAGAAAAGAAAGAGATAGCAGGACTATCTAGAACTGAAGAAAGTAGAGATTTCTCCTATGTTGTTGAAGTCTTAACTGAGGCAGGTATATCTAATAGGAGCTTGTTCACAGACTTTTCTACATGGCACTCTGCAGAATGCCCTATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAACTATGGAAAAGATCTGAAAGGCGGCTTCTATTCGATCGCATTAATTTTGGGCTCTCAGATATTCTCCAGCCATATTTGTATGTTCCAATGTGGGAAAAGCCTGTGTCAAGAAGGTTGAATGGTGAACCAAGCCAGGACATGATTGAGGAGGAGATATGGGGGTTGCTTATTGCCAATGAAAAGAAAGCCAGTAAGGAATCAGGAGACAATATGCTTGGAGGGGAAATTAGGTGGATAGAACTAGGTGAAGATATTGAAGATATTGTTAGAGAGATAGTTAAGTTGTTAATAGAGGAGCTTGCAAACGAGATGGTTTGCTTGGAGAATTTTGGAGAAGTGTAG 2427 0.3881 MESKHQTPSVILELMGLDKVPPQHPVRDKQKVLSGNYLQKIASIGVRKKRSSHQHHSLGMSTDEKEESDDVSKVVKTIRRNKHHNPSNGNGKENPYLSGTKVNGVPQQLLDASVRWKPETLVDTISPFNLETSVNSGRIAEQGSLPLEQKMNNGLQNDMHGEAGLYETFRLSKSQLDLKDETFESRITVLKANPEKRENSLKYFSFPSSCRNPHLADGLLKEIFCPKSTRVYPEMRVRKKMSYHMKFGKQCSRSFSKTSEEVSVQRGSIANKVSDTVSSSVFRGNEAFTKSSDMLDPVSVNEIQLQKVGNGARNLSYQSGFSNDKNRRNIGCKVGLNYSFARKVPMARPLYTASVIADKCETMTRDNLFQKYWGLRKNESANWSTQKSKNQDINQQDYSEDLHLRSSSEKSPSFSTYFISNHTEEDCIGPNKLKKRCYGNDFSADKPMLPHLSSSGPSPAFIDSHILQETRLTNNEVKNNKHEDSNMSKQSVVSPDSLVDCLVSDAKTQVVGWSPNNPTKQQSESTAFILTHGDNDSLSDTFSASTQQDTSEFQEDSLCSGADKDSLGSFEEAYEPSPISVLNPSFREDNSFSSECGAGVYDSSEVDDEGLDLNVSSDEDCGNESIGGDFEEKKEIAGLSRTEESRDFSYVVEVLTEAGISNRSLFTDFSTWHSAECPISPSVFEILEKKFGEQQLWKRSERRLLFDRINFGLSDILQPYLYVPMWEKPVSRRLNGEPSQDMIEEEIWGLLIANEKKASKESGDNMLGGEIRWIELGEDIEDIVREIVKLLIEELANEMVCLENFGEV. 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00261 808 MobiDBLite consensus disorder prediction 45 101 - -
Seca1g00261 808 Pfam Domain of unknown function (DUF4378) 647 798 IPR025486 -
Seca1g00261 808 MobiDBLite consensus disorder prediction 56 76 - -
Seca1g00261 808 PANTHER AFADIN 1 113 - -
Seca1g00261 808 MobiDBLite consensus disorder prediction 539 557 - -
Seca1g00261 808 MobiDBLite consensus disorder prediction 539 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00261 Seca-Chr1 2974054 2979831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00261 559 800 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 33.588 7.39e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00261 - - lang:109354222 914.835