Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00255 ATGGATCGAATTCTTCCTCCCTTGCTGCCGTTGGATTCGCACCTACAAATGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGCATCACCGTCGGCGTCATGCTTGTTCCTCAGTCAATGTCTTACGCAAAATTAGCTGGGCTTCAACCGATATATGGACTCTTTCTATACAATACCTGGTTATTAATGTTATTCTCTTTTGCAAGGAAGACTCTGGTTTTGTGCCCCTATTTGTGTATGCTGTATTTGGCTCTTCTCGCCAGCTTGCAGTTGGCCCTGTAGCATTGGTTTCTCTCTTGGTCTCTAATGTGCTAAGTAGCATAGCTGATTCATCCAGTGAATTATACACAGAGCTGGCAATATTACTGTCTCTTATGGTTGGGATACTGGAGTGCATAATGGGACTCTTGAGGCTTGGATGGCTGATCCGTTTCATTAGCCATTCAGTAATCTCTGGCTTTACAACTGCTTCGGCTATTGTGATTGGTTTATCTCAAGCAAAATACTTCTTGGGGTATGATGTAGACAGAAGTAGCAAGATCATACCAGTGGTTAAAAGTATAATAGCTGGAGCCGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCAATTATGCTTGCGATACTACTTGTCATGAAACACCTGGGAAAATCAAGGAAGTACTTGCGATTCTTGAGAGCTGCAGGTCCTCTTACAGCAGTAGTTCTGGGAACAATTTTTGCAAAAATATTTCATCCATCATCAATTTCTTTGGTGGGAGATATACCTCAGGGTTTACCAAAATTTTCTGTTCCTAAAGCTTTTGAGTATGCAGAGTCCTTAATTCCAACTGCTCTTCTTATAACAGGTGTGGCTATACTGGAATCAGTAGGAATTGCCAAGGCATTAGCAGCAAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTTGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACTACAGGATCCTTTTCAAGGTCAGCTGTTAATCATGAAAGTGGGGCAAAATCTGGAGTTTCGGGGATAATTTCAGGAATTATAGTAACTTGTGCACTTTTGTTTCTAACGCCATTATTTGAGTACATACCTCAGGTTTGCTTTCTTTATTGA 1137 0.4169 MDRILPPLLPLDSHLQMARVFPGRSHGRHHRRRHACSSVNVLRKISWASTDIWTLSIQYLVINVILFCKEDSGFVPLFVYAVFGSSRQLAVGPVALVSLLVSNVLSSIADSSSELYTELAILLSLMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDVDRSSKIIPVVKSIIAGADKFSWPPFVMGSIMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTIFAKIFHPSSISLVGDIPQGLPKFSVPKAFEYAESLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIISGIIVTCALLFLTPLFEYIPQVCFLY. 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00255 378 Pfam Sulfate permease family 54 374 IPR011547 GO:0016020
Seca1g00255 378 PANTHER SULFATE TRANSPORTER 72 375 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00255 Seca-Chr1 2935166 2945744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00255 72 373 Inorganic Solute Cotransporters AT3G12520 78.146 4.14e-167 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00255 K18059 - gmx:100775789 540.421