Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00237 ATGGAATCAAGGTACATGCATATATATGTATACAGCTTATGGCAGGAACAGAACAATCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCATCAATGAACAAAGGTTGATTGGTGATGCTGCCAAAAATCAGGCTGCTGGCAATCCAGCAAACACTGTCTTTGGTAATCAATCCTATATGGCTTCCTTTTACATCTGA 225 0.4 MESRYMHIYVYSLWQEQNNRAEIIHNEQGNRTTPSFVAFINEQRLIGDAAKNQAAGNPANTVFGNQSYMASFYI. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00237 74 PRINTS 70kDa heat shock protein signature 28 40 - -
Seca1g00237 74 PRINTS 70kDa heat shock protein signature 50 58 - -
Seca1g00237 74 FunFam heat shock 70 kDa protein-like 5 73 - -
Seca1g00237 74 Gene3D - 5 72 - -
Seca1g00237 74 SUPERFAMILY Actin-like ATPase domain 12 69 IPR043129 -
Seca1g00237 74 PANTHER HEAT SHOCK PROTEIN 70KDA 11 65 IPR013126 GO:0005524|GO:0140662
Seca1g00237 74 Pfam Hsp70 protein 17 66 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00237 Seca-Chr1 2765887 2766335 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00237 17 73 Calmodulin-binding Proteins AT3G12580 61.404 5.63e-19 77.0