Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00217 ATGTGGAAGCTGCAGGAATTCATGAGACCACCTACAACTCTCATGAAGTGTGATGTGGATATCAGAAAGTACATGTATGACAACATTGTTCTTAGTGTTGGCTCAACCATGTTCCCTGGTATTGTTGACCGTATGGCAACCATTCCATGTTTCTCTGCCCCTTTTTCACTCTTAGAAAAAATAAATTGTATCATTTGTTTTCACTCCTCAAACCTCTTCCCGTCTCTTCTTTTCTCAGATACTCACCCATTTTCACACTATTTTTTCCCATTTTTTAATTCTCTTTTCTCCTCCTTCCCATAG 303 0.3894 MWKLQEFMRPPTTLMKCDVDIRKYMYDNIVLSVGSTMFPGIVDRMATIPCFSAPFSLLEKINCIICFHSSNLFPSLLFSDTHPFSHYFFPFFNSLFSSFP. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00217 100 SUPERFAMILY Actin-like ATPase domain 12 56 IPR043129 -
Seca1g00217 100 Gene3D - 11 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00217 Seca-Chr1 2542775 2543077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00217 13 61 Cytoskeleton Gene Families AT5G09810 61.224 2.68e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00217 K10355 - smm:Smp_202970 61.6178