Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00204 ATGTACTTGTTTTCTTTTGGGAATATACAGTGGTTGATGGTGGCAGATATAGAGATGGTGAAAGAAATCATCTTGAACAACTCTTTGGTTCTAGGGAAGCCTTCTTATCTTTCCAAAGATATGGGGCCACTCTTAGGCCGTGGTATATTGTCATCAAGTGGGTTGATTTGGGCTCATCAGAGGAATATAATTGCCCCTGAACTATACCTAGATAAGGCAATCGTTAATCTAATAGTTAACTCCACAAATATAACACTAAAATCTTGGGAGACTAAACTAGAAAGTGAGGGAGTAGTTTCAGAGATTAAAGTTGATGATGATCTAAGAGGCTTGTCAGCTGACATAATTTCCAGAGCTTGTTTTGGGAGCAATTATATTGAAGGAAAAGAAATATTCACAAAGCTTAGAGATCTTCAAAAACTCCTTTCTAAGATATATGCTGGAATTCCAGGCTTTAGGTATGCATGA 468 0.3718 MYLFSFGNIQWLMVADIEMVKEIILNNSLVLGKPSYLSKDMGPLLGRGILSSSGLIWAHQRNIIAPELYLDKAIVNLIVNSTNITLKSWETKLESEGVVSEIKVDDDLRGLSADIISRACFGSNYIEGKEIFTKLRDLQKLLSKIYAGIPGFRYA. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00204 155 SUPERFAMILY Cytochrome P450 2 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00204 155 Pfam Cytochrome P450 2 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00204 155 Gene3D Cytochrome P450 1 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca1g00204 155 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00204 Seca-Chr1 2406055 2406701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00204 1 143 Cytochrome P450 AT5G24910 50.685 1.40e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00204 K24544 - gmx:100780335 242.662