Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00184 ATGGCTAAAAAAAATGAGGGACATGCTATAGGAATTGACCTTGGCACTACCTACTCATGTGTTGCAGTATGGCAGGAACAGAACAATCGAGCAGAGATCATCCACAATGAACAAGGAAACAGAACCACTCCTTCTTTTGTTGCTTTCACTGACACAAAAAGGTTGGTAGGAGATGCTGCCAAAAATCAGGCTGCCTCTAATCCATCCAACACTGTCTTTGGTAATTGA 228 0.4254 MAKKNEGHAIGIDLGTTYSCVAVWQEQNNRAEIIHNEQGNRTTPSFVAFTDTKRLVGDAAKNQAASNPSNTVFGN. 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00184 75 SUPERFAMILY Actin-like ATPase domain 8 74 IPR043129 -
Seca1g00184 75 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca1g00184 75 Gene3D - 1 75 - -
Seca1g00184 75 Pfam Hsp70 protein 9 73 IPR013126 GO:0005524|GO:0140662
Seca1g00184 75 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca1g00184 75 PRINTS 70kDa heat shock protein signature 60 68 - -
Seca1g00184 75 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca1g00184 75 FunFam heat shock 70 kDa protein-like 3 75 - -
Seca1g00184 75 PANTHER HEAT SHOCK PROTEIN 70KDA 9 73 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00184 Seca-Chr1 2237495 2237722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00184 1 73 Calmodulin-binding Proteins AT3G12580 75.342 2.72e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00184 K03283 - lja:Lj0g3v0174969.1 139.813