Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00182 ATGGCCAGAAGATATCAAGGATGTGCGGTTGGAATTGACCTTGGCACGACTTACTCGTGCGTTGCAGTGTGGCAAGAGCAACACAGTAGAGTGGAGATTATCCACAACGATCAAGGTAACAAAACCACACCTTCATGTGTTGCTTTCACTGACATCCAAAGATTGTTTGGTGATGCTGCGAAGAATCAGGCTGCCGCCAACCCTGAAAACACCGTCTTTGGTATGTTAAGAGGTTAA 237 0.4641 MARRYQGCAVGIDLGTTYSCVAVWQEQHSRVEIIHNDQGNKTTPSCVAFTDIQRLFGDAAKNQAAANPENTVFGMLRG. 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00182 78 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca1g00182 78 SUPERFAMILY Actin-like ATPase domain 8 76 IPR043129 -
Seca1g00182 78 Gene3D - 2 77 - -
Seca1g00182 78 Pfam Hsp70 protein 9 75 IPR013126 GO:0005524|GO:0140662
Seca1g00182 78 FunFam heat shock 70 kDa protein-like 3 76 - -
Seca1g00182 78 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca1g00182 78 PRINTS 70kDa heat shock protein signature 38 50 - -
Seca1g00182 78 PRINTS 70kDa heat shock protein signature 60 68 - -
Seca1g00182 78 PANTHER HEAT SHOCK PROTEIN 70KDA 9 75 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00182 Seca-Chr1 2211096 2211559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00182 1 77 Calmodulin-binding Proteins AT3G12580 71.429 3.42e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00182 K03283 - gmx:102667572 137.502