Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca1g00149 | ATGTTTGAACAGGCTATTATCCATTTGGGAGCAATTGAGTTGCTTGGAGAGTGTTTTTCATCATCTAGGAAAAAGAACCGGCCTTTGCCACAAAGACTAAGCTGTATGCATCGTGCGCCATACCAGGAGCATACTGAGAACATTGGTGCCAGCAATAGCGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATTACAAAAATTGAGGGTAGAGGTAATGGCATCAAAACAAATATTGTCAACATGGTTGATATTGCAAAAGCGTTGGCAAGGCCAGCCTCTTACACAACAAAGTATTTTGGTTGTGAACTTGGGGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAATGGGGCACATGATACTGCAAAACTTGCTGGTCTTCTAGAGATTTTCATCAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAATCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGATATGAGGGACAAGCTGACTACCTTCATCATTAAGAACCCTCCTGAAATCAAGAAAGGATCCAAAGACAAGAAGGCCATGCGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAAGCAGCTGATGAGGAGCTGAAAAAAATTAAGAAAGAGAGTAAGAAGAAAGGCACTACGTCTTCTAAGGATGGCGCCACAAAATCTACCTCTTCAAGGAAGAAAGCAAATGGCTCTGATGAAGACCGCACATCTCCTACTCATAGTCTAGTTGATGAGAAGGATGAGGCTCAAGATGCAGAAAATGATGATGATGACGTGCAATGGCAAACAGATACATCACTAGAGGCTGCTAGACAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACTAATGAACCAGAGAAGAAGGAGAAAGCAGCAAATATGGTAAGTAATAATTCTGAGAATGGTAACTCCATGCACTACAGGACTCTGGTTGAGGAAGTCAAAGCAAATTTGAAGAACGGTGCTAAAGCAAAAGAATTGCTGACCCATTTAGCAACACTTACTGGATCTGCTCAAGAAAAGATGAGTGCTCTTTATGAAGCCCTTTTCATGGGCATTGAGAAAGGGTTTGGAAAAGAAGCTCTCAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGACGAGGGAATGCAGTTGTTATTGTTGCATGCAATTGAGGAATTTTCTTGCAAGTCTACTTCCAATGCATTAAAGGAGGTTGCTCTGGTCTTGAAGGCTCTCTATGATGCTGATGTGTTGGAGGAAGAGCAGATAGTGCAGTGGTATCAGAAAGGGCTGAATGGCGATAACAAGAACTCCCAGATTTGGAAGAATGCTCAACCTTTCATTGATTGGCTTCAGAATGCCGAATCAGAATCGGAGGAAGAATGA | 1458 | 0.4211 | MFEQAIIHLGAIELLGECFSSSRKKNRPLPQRLSCMHRAPYQEHTENIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEIKKGSKDKKAMRRAEKERLKEGEAADEELKKIKKESKKKGTTSSKDGATKSTSSRKKANGSDEDRTSPTHSLVDEKDEAQDAENDDDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKKEKAANMVSNNSENGNSMHYRTLVEEVKANLKNGAKAKELLTHLATLTGSAQEKMSALYEALFMGIEKGFGKEALKKKSYLAAAVAEDEGMQLLLLHAIEEFSCKSTSNALKEVALVLKALYDADVLEEEQIVQWYQKGLNGDNKNSQIWKNAQPFIDWLQNAESESEEE. | 486 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca1g00149 | 485 | MobiDBLite | consensus disorder prediction | 191 | 267 | - | - | |
Seca1g00149 | 485 | MobiDBLite | consensus disorder prediction | 191 | 279 | - | - | |
Seca1g00149 | 485 | FunFam | Eukaryotic translation initiation factor 5 | 147 | 187 | - | - | |
Seca1g00149 | 485 | SMART | 542_3 | 393 | 481 | IPR003307 | GO:0005515 | |
Seca1g00149 | 485 | SUPERFAMILY | ARM repeat | 335 | 479 | IPR016024 | - | |
Seca1g00149 | 485 | Gene3D | - | 41 | 146 | - | - | |
Seca1g00149 | 485 | ProSiteProfiles | W2 domain profile. | 328 | 485 | IPR003307 | GO:0005515 | |
Seca1g00149 | 485 | Gene3D | - | 147 | 187 | - | - | |
Seca1g00149 | 485 | SMART | eIF2Bneu4 | 57 | 171 | IPR002735 | GO:0003743|GO:0006413 | |
Seca1g00149 | 485 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 407 | 485 | IPR003307 | GO:0005515 | |
Seca1g00149 | 485 | FunFam | Eukaryotic translation initiation factor 5 | 43 | 146 | - | - | |
Seca1g00149 | 485 | CDD | W2_eIF5 | 338 | 483 | - | - | |
Seca1g00149 | 485 | Gene3D | - | 325 | 485 | - | - | |
Seca1g00149 | 485 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 45 | 484 | IPR045196 | GO:0003743|GO:0006413 | |
Seca1g00149 | 485 | Pfam | Domain found in IF2B/IF5 | 53 | 169 | IPR002735 | GO:0003743|GO:0006413 | |
Seca1g00149 | 485 | SUPERFAMILY | Zinc-binding domain of translation initiation factor 2 beta | 140 | 175 | IPR016190 | GO:0003743|GO:0006413 | |
Seca1g00149 | 485 | SUPERFAMILY | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 52 | 143 | IPR016189 | GO:0003743|GO:0006413 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca1g00149 | Seca-Chr1 | 1831229 | 1833936 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca1g00149 | 46 | 478 | Eukaryotic Initiation Factors Gene Family | AT1G36730 | 63.146 | 1.35e-178 | 506 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca1g00149 | K03262 | - | gmx:100777906 | 698.738 |