Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00057 ATGGCTACCATTTCACTTAGGCACAACCCACAAGTGAACACTACTACTCAACAAAGAGGAGTCATCAGTGAAGAAATTCAAGGACTCATAAGAGTTCACAAAAATGGACATGTTGAGAGGCCACCAATTGTGCCTAATGTCTCATGCAAAGTGGCATCAGAACGTGGTGTCACTGCCAGAGATGTTATAATCAATAGAGAGACCAATTTATGGGCACGTATTTATGTCCCAGTAAGCTGTCAAAGCAAGGTTCCTTTGCTTGTTTACTTCCACGGTGGTGGATTCTGTGTTGGCTCTGCTTCTTGGAGCTGTTACCATGAGTTCTTAACCAATCTTGCTTCCAAAGCAAACTGTGTCATTGTCTCTGTGGACTACCATTTAGCCCCTGAGAACCGTATTCCTTCTGCATATGATGATGGTTTCAATGTTCTCATGTGGGTGAAAAGAGAAGCTCTAAATGGCTGTTCAAGTGTGCAAAATTGGTGGATGAGTCGTTGCAACTTTTCTTGCATGTTTCTAGCTGGTGACAGTGCAGGAGCCAACATAGCTTACAATGTGACCACCACACGCCTTAGATCAACCATTCTGAATCCATTGTCTCTCAAAGGTGTCATCTTGATCCAACCTTTCTTTGGAGGAGAGGAACGAACTTGCTCTGAAAAGAATTCCCATCAACCACCCAATTCAGCTCTCACTTTATCAGTTTCTGATACTTATTGGCGTTTAGCACTTCCTCTTGGTGCTACTCGTGACCACCCATATTGTAACCCTCTTGCAAGCATGGCCAAGTTGAGAGATTTGAGGCTTCCATCCATTATGGTATGTGTTTCAGAAATGGATATTCTCAAAGACAGAAACTTGGAGTTCTCAAATACTTTGGCAAGAGCAGGGAAAAGGGTCGAAACATTTGTCTACAAAGGAGTAGGCCATGCATTCCAAGTGTTGCATAATTATCAACTTTCTCATCCTCGGACCCAAGAAATGATATCTCATATCAGGAACTTCCTGAACCAGTAA 1017 0.4277 MATISLRHNPQVNTTTQQRGVISEEIQGLIRVHKNGHVERPPIVPNVSCKVASERGVTARDVIINRETNLWARIYVPVSCQSKVPLLVYFHGGGFCVGSASWSCYHEFLTNLASKANCVIVSVDYHLAPENRIPSAYDDGFNVLMWVKREALNGCSSVQNWWMSRCNFSCMFLAGDSAGANIAYNVTTTRLRSTILNPLSLKGVILIQPFFGGEERTCSEKNSHQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLASMAKLRDLRLPSIMVCVSEMDILKDRNLEFSNTLARAGKRVETFVYKGVGHAFQVLHNYQLSHPRTQEMISHIRNFLNQ. 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00057 338 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Seca1g00057 338 Gene3D alpha/beta hydrolase 11 337 IPR029058 -
Seca1g00057 338 PANTHER ARYLACETAMIDE DEACETYLASE 25 316 - -
Seca1g00057 338 Pfam alpha/beta hydrolase fold 87 313 IPR013094 GO:0016787
Seca1g00057 338 SUPERFAMILY alpha/beta-Hydrolases 24 338 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00057 Seca-Chr1 974270 975286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00057 1 337 Carbohydrate Esterase AT5G16080 52.586 1.42e-123 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00057 - - gmx:100819429 558.91