Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00053 ATGGCAGCAGCACCAGATTCTTCTCGCGAGGAGAATGTTTACATGGCGAAGTTGGCGGAGCAGGCTGAGCGTTATGAGGAGATGGTTGAGTTCATGGAGAAGGTTGCCAAGACAGTGGATGTTGAGGAATTGACCGTGGAGGAGAGGAATCTCCTCTCTGTGGCTTACAAGAATGTGATTGGTGCTAGGAGGGCTTCCTGGAGGATCATTTCCTCCATTGAACAGAAGGAGGAGAGTAGAGGCAATGAGGACCATGTCGCTATAATAAAGGATTACAGGGGCAAGATTGAGACTGAGCTCAGCAAGATATGTGATGGGATTTTGAGCCTCCTTGAGTCCAATCTTATCCCATCTGCTGCATCCCCTGAGTCTAAAGTGTTTTACCTTAAAATGAAGGGTGACTACCACAGGTACCTTGCTGAGTTTAAGACCGGTGCAGAGAGAAAAGAAGCTGCAGAGAGTACCTTGTTAGCTTACAAGTCGGCTCAGGATATTGCACTTGCTGACCTGGCCCCCACCCACCCTATAAGGCTGGGTCTTGCACTCAACTTTTCTGTGTTCTATTATGAAATCCTTAACTCACCAGATCGTGCTTGTAATCTCGCGAAGCAGGCATTTGATGAGGCAATATCCGAGCTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGACAATCTGACTTTGTGGACATCTGACATCACGGATGATGCTGGAGATGAGATCAAAGAAACATCTAAGCAACAATCAGGCGATGGGCAGCAGTGA 792 0.4747 MAAAPDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESNLIPSAASPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKETSKQQSGDGQQ. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00053 263 SUPERFAMILY 14-3-3 protein 8 241 IPR036815 -
Seca1g00053 263 PIRSF 14-3-3 4 251 IPR000308 -
Seca1g00053 263 Coils Coil 15 35 - -
Seca1g00053 263 FunFam 14-3-3 protein epsilon 5 252 - -
Seca1g00053 263 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Seca1g00053 263 Gene3D - 1 252 IPR036815 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Seca1g00053 263 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Seca1g00053 263 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Seca1g00053 263 PANTHER 14-3-3 PROTEIN 9 243 IPR000308 -
Seca1g00053 263 SMART 1433_4 9 252 IPR023410 -
Seca1g00053 263 Pfam 14-3-3 protein 15 239 IPR023410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00053 Seca-Chr1 936554 940260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00053 7 262 14-3-3 family AT3G02520 89.883 1.77e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00053 K06630 - gmx:547657 486.493