Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00041 ATGCATTTTGCAGATTCTAGTTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAGTGCTGAGGAGGCGAGAGAGAGTGTGTGTGTGTGTGTGGCGATGAGTATGGCATCTCCACCTCCTGCGGCGGAAATCCTGTCGCTGTTCCGTTCGCTTCTACGTGTGGCTCGTCAGTTTCCTGATTACAACATCAGGGAATACACCAAACGACGCACCATCGATGCCTTTCGTCAAAACGCAGCACTTTCCGACCCTCCTTCCATTTCCCACGCCTTCTCCCACGGCAACTCCCAGCTCCAACTCGCTAAACGACAGGCCGTTGTTTACTCTCTCTATGCCCCTCAACTTCCCAGCGTCATGGACATTCATAAACCTCAACATAGACCCTCTTAA 426 0.507 MHFADSSSLDISSGTTALTALVFGRTMIIASAEEARESVCVCVAMSMASPPPAAEILSLFRSLLRVARQFPDYNIREYTKRRTIDAFRQNAALSDPPSISHAFSHGNSQLQLAKRQAVVYSLYAPQLPSVMDIHKPQHRPS. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00041 141 PANTHER OS08G0239000 PROTEIN 39 134 - -
Seca1g00041 141 Pfam Complex 1 protein (LYR family) 55 111 IPR008011 -
Seca1g00041 141 CDD Complex1_LYR_LYRM4 55 123 IPR045297 GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00041 Seca-Chr1 684719 685484 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00041 2 36 PP2C-type Phosphatase Gene Family AT2G33700 71.429 7.49e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00041 K22069 - zju:107415951 131.724