Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00020 GGCTCCCTCTCCAAAACTGCTCTCCAAATCCTCAAACTCCTCGATGAACACGACCGAAACGACGCCGTTCCTGTCTCCGACCCCATATGCCGCGCCCACTGTGCCGTTGTCGTCGAGTGCACTGTCAAGTACCTCATTAACTCCCCCGAAGAGCCCTCCGGCGAATACCTCTCCTCCGTCCGCCGGATCTGGCGCGGCCGAGTCGTCATGCTTATGATGGAGGGTCGACGAAGCGAGCCGGTCTCCGGCGAGTTGGAGCGGTGGAGGGACGACTTAGAGGCCGCACTTTTGGACCCTAGTGTTTCTGAGAGGCTCGCGGGTTTGAACACCAGGTTGGACGCGGTGAACGAGTTGAAGGCATATCTGAAGGAAGCATGGGAAATTATGGGACCTTCGTTTCTCGATTCGGTTGCGATGATGTCGAAGGCGAAGGCATTGCGCCCTGAAGGTGTCTATGAACTTGCACTACCGGTGAGGACGCGTGATGAAAGGTCAGAGGGTTTTGCGAATGAGAAAAATGACTCTGTTGGTGGTGATAGGAGTGAATCTTCCGATAATGATGATGATGGCGCATGCTGCATGGTCATGGATAATGTGGCAGTGATGGCTAAAAATCAGGGCAAGGAACAAATGAAAGAGAGAATTGGTGCTTCTGTTGATACAAGTCAGAAAGTAGGAGGTTGTGATTCTCCTGCAAAGGAAGATGAAGCATGCAGAAGATCTTGTGCCCTTCATAGCAACTCTCTCCCTCGTGTTTATTCTACCAAGCTTCCTCCCCATCGTTCGAAACCTATTACCTCCGCTCGAAACCTACCACTGTCGCTTCTCATAACCGCTCTGCGTTTGTTCCCAACCACATCCCAGGTTGATGAGAAGGTGGGGGTGAGGAAAGGAACAAAAAATGGTCAAGGACATACTATTTTTCCTGGAAGTGCAAAATTCTCGGTAGCAACTGACAGTACTACTCCAACAACAAATTTGCAAGCCATGTCTATGATGGTTAGGAGTGAAAATGGTGGCAAAGTTGCAATGCATGACTCTGAGTTGTGTCTGAAAATGGGATTAAATGCGCCCATACAATCACAAAATTCACATATTGGGAGGCAACTAAATGTGGAGTTTGAGATGGTAGTTATTTCAACTTTTACAGTTTGCACTACAGTTCTTGTTTTACAAGCTTTCTTTAGTACTGTTGGTGTTATTGGCTTATATTTCAGGATGGAGGCATTGATTGTTAGCAAGAACAACATGCAACCAAGCACCAAAAAGAAAATGATTCGAGAGGGTGGCGAACAGATAGGCCTAAAGCACTTTGAGCCAATCAAATCTTTGGGGTCAGGAGATACTTAA 1350 0.4793 GSLSKTALQILKLLDEHDRNDAVPVSDPICRAHCAVVVECTVKYLINSPEEPSGEYLSSVRRIWRGRVVMLMMEGRRSEPVSGELERWRDDLEAALLDPSVSERLAGLNTRLDAVNELKAYLKEAWEIMGPSFLDSVAMMSKAKALRPEGVYELALPVRTRDERSEGFANEKNDSVGGDRSESSDNDDDGACCMVMDNVAVMAKNQGKEQMKERIGASVDTSQKVGGCDSPAKEDEACRRSCALHSNSLPRVYSTKLPPHRSKPITSARNLPLSLLITALRLFPTTSQVDEKVGVRKGTKNGQGHTIFPGSAKFSVATDSTTPTTNLQAMSMMVRSENGGKVAMHDSELCLKMGLNAPIQSQNSHIGRQLNVEFEMVVISTFTVCTTVLVLQAFFSTVGVIGLYFRMEALIVSKNNMQPSTKKKMIREGGEQIGLKHFEPIKSLGSGDT. 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00020 449 PANTHER MYB TRANSCRIPTION FACTOR 1 206 - -
Seca1g00020 449 MobiDBLite consensus disorder prediction 163 187 - -
Seca1g00020 449 MobiDBLite consensus disorder prediction 163 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00020 Seca-Chr1 450281 454308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00020 32 138 Single Myb Histone (SMH) Gene Family AT1G15720 33.028 9.84e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca1g00020 - - aprc:113849788 238.039