Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca1g00019 ATGGATGGTGGTATGAATGTGATGATAAAGGAAAAGGGGAATAAGAAAGGGCTTATCACCAAAACATGGGAGCGATGCAAGTCGATAGGATCATCAAAGAAGGAGGCAACAATTGATAATCTAATTAGGACAAAGAGGAGCAAATCGTGGCCAAGGCGAGGCAAGAAGAAGAATAAGAGTACTAGTGTAGTGGCCCCTGAAGGTTGCTTCTCCGTGTATGTTGGGCCTCAAATGCAACGGTTTGTGATAAAAGCAGAGTATGCTAACCACCCTTTGTTCAAGATGTTGCTTGAAGAAGCAGAGTCAGAATACGGTTATAACAGCCAAGGCCCTTTAGCCCTTCCTTGTAACGTTGATATGTTTTACAAGGTGTTGATGGAATTGGAAATGGATGAAGAAACTAGTACTACTACTACTAATCCTCAAGGCTGTACTAGTGTTTTATTTGGGAAACGTTCTCGCAGCTCTTATCATCTTCTTAGCCCGTCGCGAATGCTTCTCATAAACAACTTCTGA 516 0.4225 MDGGMNVMIKEKGNKKGLITKTWERCKSIGSSKKEATIDNLIRTKRSKSWPRRGKKKNKSTSVVAPEGCFSVYVGPQMQRFVIKAEYANHPLFKMLLEEAESEYGYNSQGPLALPCNVDMFYKVLMELEMDEETSTTTTNPQGCTSVLFGKRSRSSYHLLSPSRMLLINNF. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca1g00019 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 56 125 IPR003676 GO:0009733
Seca1g00019 171 Pfam Auxin responsive protein 43 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca1g00019 Seca-Chr1 447462 447977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca1g00019 65 141 Calmodulin-binding Proteins AT3G43120 41.558 1.71e-18 76.3