Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07043 ATGAGAGCGCATGACAGGGCTTCTGCCAGTGAGTATTGTTGCTGTTATTCAGGTTATGAGTGGGATATTGGACATTTTCATAGGGCTCAGAAACCTAATGTGGACTGCTTTAGGAGTACTTCATTTGGACTGTCTCAGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACCGGGGGTATTCGATGTGATGTGTATTCTACAATACTGAGGCAGCAGGGATTTCAGAATTTGTATACCCTCAAGGGAGGTGTTTCTCACTATTTAAAGAATGAAGGTCCTGCAGAATGGGTAGGAAACTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTGTTTACTATCCTGGGGACACAACTGAAGCAGAGACTACTCCAGTTTCTGGAGATGATAGGTTTGCAAAATGCTACATATGTAATTCGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGACTGTAATTTTCTTTTTCTATGCTGTAGAAAATGTGTAAAGGATCTAAGAGGATGTTGTTGTTTGACTTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGATATCAGAGATACAAAAAGTGGCACATCTATCGTGATATGGATTTGCACGGCAATATGAGAACTTCAAATTGA 681 0.4009 MRAHDRASASEYCCCYSGYEWDIGHFHRAQKPNVDCFRSTSFGLSQEEITASDPLSNVDKEKANILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSVYYPGDTTEAETTPVSGDDRFAKCYICNSEVSELRHRNCANLDCNFLFLCCRKCVKDLRGCCCLTCTTAPRLRPVLNGYQRYKKWHIYRDMDLHGNMRTSN. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07043 226 Pfam Rhodanase C-terminal 111 192 IPR022111 -
Seca12g07043 226 Gene3D - 16 131 IPR036873 -
Seca12g07043 226 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 18 212 IPR020936 -
Seca12g07043 226 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 18 122 IPR036873 -
Seca12g07043 226 ProSiteProfiles Rhodanese domain profile. 19 109 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07043 Seca-Chr12 162316571 162320661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07043 17 217 Sulfurtransferasese or Rhodanese AT1G17850 69.668 2.08e-104 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07043 - - gmx:100814358 399.823