Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07034 ATGGCCAAGAGATCAGATTTTGCTCAGAAGTTGCTCGATGATCTACGGCTAAGGAAAGAACGAATGGCTTCATCTCAGAGGTCAAACCAATCCCACTCCCACCATTTGCCTATAGATGCATTCGCTTACACCAAGCAAACATACAGAGGATCCAGAAATACAAAAGTTACTGAAATTGTTAGTTCCAGAACCGGGGGGGAGATGCTGAATAGGAGGCACAGATCAGTAAACAATGGAGACTTGTCAAATCAGATTATTCCATATCAGAGCTCGGGTAATGTGTCCCAAGCCCTGGCTTTTGCTTTTGAGAATGGGGGGAAACTAAGAAGGGCTGATTTTTCTTATCCTAATTCAATTATGGGTTTCCTTCACCAAATTAAAAGGGGAACAAATTTGGATAGGCAACTAGCTTCAACTAGCCACTATCCTACTCTCTCTCTCGTGCAAATAAATGAGATATCCAAAGGTGCACAGAAACTAAACCACATATTGAGAGCCTGCTCCAATGGTCTTAACATGGATACATCTTCATTACAATTCGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAGAAAAATTCAGAGTTTGTGATTACCTCTCAGGCTCAGAACAAAAACCGAATCAGACTATTAGATGAGGAGGAGGAGGATGATGATGACAGAAAGATGGAAATTTCTGAGCAAATGCAATTGGCACGACCAAATTTCTCCTTTGACAAGCCCCCAAGGCACATCCAAGAAGTTGGAAAGGCTATTTCCATACAGAGGCCAATGACTAAGGAAGCCAGAAACTCAAATAATGAAAAGAAAAGTGTGAAGAAACAAGTTTCTCAAAAGCGATCAACTAGCTCTAGCTCTGACATTTCAGAACGGCAAAACCAGACAACCTCCAACCAAGAGAAAGGCAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACAACCTGCCTGAGAAAGTTGAAATAGGAGGAAATCAAGGAATGGCATCCAAGCATACTGCAAAAGGAAGTACTAAGAAGAATGAATTGAAAAACAAACAAACAGTCAATTTGATACCTATGGCTACTAAAAACCAAAAAATGGTAGGAGTAGGAGCCTTGAAAATGCCAGAAAGTCAGAATGAGGAGCTGATGTTTGGTGCGCTCCTCCAAAAGGCCAGCTATGAGGTGGTTGTTCAGAATCAGAATGGAAAACCACTATGGAGGGACCCTGATGGAATAAAAGCATTAACAAGTTTTGACAAGGCCAGCACCAAAATGGACAGGCATAACACAAATTCTGCTCAAAAGAACCTTATTAGAGAGAGTCAAAATGATGTTCAGGTGATAGGAAGAAAACAAGACCACCCAAATTACAGTAGCAGAGAACAGAAAGGCACAGTGAAGGTCAGAACCAATGATCCACTTGTAAATAATATGTTGGCCCAGCTGGAACAAGTGCATGAAAGATCAGAACTTAAATCTTCGATTCAGGTTGAAAAAGAAATCAAAGGAAGTATTATTCAACCGGAAAAGAAACACACAAACAAGCACATATTGAACAAGGAAAAGAATCCTCGAAACCATTTTGGAGTTCAAAAGCCATACATACTCTCCAAAAATGGGCCTCAAGAAGAAAAGCATCATAGAGAACAGCAGCTCCAGCTGAGGGAAGAACAAATGTTGATGATGAGACCACAAGGAGGGTGTGATATGACATCCAAGAAGTCATCAAAACACCCTCATCAATTGATCAACCCTCAGAAGAAGCTAAACCAAGCCACAGTGTTGAAGAAAAACTTGGGAGAAAATGTTGCATCTATGAAATTGGAAAGTAGCCACTATGATGATCATGATCTAGTTAAAGATGACACATCCAATGATACAAATGAAAAAGTAGGAGAAATTATGAATAGCAAGTCAGGCCAAATTTCCTCTCCAAGAGATCAAGGAGTTGAACGAGCTAAAGGAAGGCATGGCGTCAAAACACTAAAGGATGAAAAACACGTTCATAAACTGGCCAGAAAGAAAATAATGAATAGCAGAAAGCAAAGAGTTGACATGCCTGGAAGAAATGGAGCAAAGCTCATCAGTGATAAAGGAAAACAACAGATTCCCAGTTTGCAAGAAGCGAGAGATAGAGCACCTGACAAAGTAAAAGTCTTGCATGGAGCTGAGCAAGAAAGGGTTAACATGTTCAGAGAAGCCGATACATGCATCATTAGCTCCAATGAACCAATAGCTGCAACAGTGGAATTGGATGTAAAGAGCCAACCACGTAAGGAAGCTGAGCTGCCTCCTACATTACACAGTAGTTCTGGTGGCGGAGAACTTCAAAGCCAACAAGAATATCATTACCAAGATGTGCAATCGGTAGCAATCAATTTGCAAGATCAATCTGTTCCTGTGGCAGTAAATGAAGGATTCAAGACTGGTGAAATTGCATTACGTAAAACAAATGGTGAGTTTAATTTTGGTTCTAGATTCAATTTTTATTTCTAA 2517 0.4048 MAKRSDFAQKLLDDLRLRKERMASSQRSNQSHSHHLPIDAFAYTKQTYRGSRNTKVTEIVSSRTGGEMLNRRHRSVNNGDLSNQIIPYQSSGNVSQALAFAFENGGKLRRADFSYPNSIMGFLHQIKRGTNLDRQLASTSHYPTLSLVQINEISKGAQKLNHILRACSNGLNMDTSSLQFAKELLQGAIDLEESLRMLVDLQKNSEFVITSQAQNKNRIRLLDEEEEDDDDRKMEISEQMQLARPNFSFDKPPRHIQEVGKAISIQRPMTKEARNSNNEKKSVKKQVSQKRSTSSSSDISERQNQTTSNQEKGRIPNVIAKLMGLDNLPEKVEIGGNQGMASKHTAKGSTKKNELKNKQTVNLIPMATKNQKMVGVGALKMPESQNEELMFGALLQKASYEVVVQNQNGKPLWRDPDGIKALTSFDKASTKMDRHNTNSAQKNLIRESQNDVQVIGRKQDHPNYSSREQKGTVKVRTNDPLVNNMLAQLEQVHERSELKSSIQVEKEIKGSIIQPEKKHTNKHILNKEKNPRNHFGVQKPYILSKNGPQEEKHHREQQLQLREEQMLMMRPQGGCDMTSKKSSKHPHQLINPQKKLNQATVLKKNLGENVASMKLESSHYDDHDLVKDDTSNDTNEKVGEIMNSKSGQISSPRDQGVERAKGRHGVKTLKDEKHVHKLARKKIMNSRKQRVDMPGRNGAKLISDKGKQQIPSLQEARDRAPDKVKVLHGAEQERVNMFREADTCIISSNEPIAATVELDVKSQPRKEAELPPTLHSSSGGGELQSQQEYHYQDVQSVAINLQDQSVPVAVNEGFKTGEIALRKTNGEFNFGSRFNFYF. 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07034 838 PANTHER OS01G0228800 PROTEIN-RELATED 8 808 - -
Seca12g07034 838 MobiDBLite consensus disorder prediction 288 314 - -
Seca12g07034 838 MobiDBLite consensus disorder prediction 261 315 - -
Seca12g07034 838 MobiDBLite consensus disorder prediction 334 353 - -
Seca12g07034 838 MobiDBLite consensus disorder prediction 687 721 - -
Seca12g07034 838 Pfam DUF761-associated sequence motif 310 331 IPR032795 -
Seca12g07034 838 MobiDBLite consensus disorder prediction 763 785 - -
Seca12g07034 838 MobiDBLite consensus disorder prediction 645 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07034 Seca-Chr12 162218843 162223895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07034 1 330 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 36.676 6.35e-45 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07034 - - lja:Lj0g3v0352539.1 998.423