Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07014 ATGGAAGAGTCATTTGTTCGCGACCGCCGCCAAGTCAACCTCCGTCTCCCCCTCCCGGAGCCTCGTACCAGTTTCCCTCTCCCTTTCCCCTTGCCTCCACCCCCTGCAGCCTCCGCCGCCATCGGCCCCAACGACATCGAAAAGCTTCACGTTCTTGGCCACGGCAACGGCGGCACCGTCTACAAAGTTCGCCACAAGCGCACCTCTGCTGTGTACGCTCTCAAGATCATCCACGCAGACTCCGACCCCGTCACCCGAAGCCAGATCCGACGAGAAATGGACATCCTCCAGCGAACCGACTCTCCTCACGTGGTCCAGTACCATGGCTTCTTCGAGATAGCCTCTGGCGATGTGGCGATCGTGATGGAGTACATGGATTTGGGGACTCTGGAAACGATGCTGAAGAAGAAGGGGACGTTCTCGGAAACGCAGCTGGCAGGGGTGGCGCGTCAGGTGCTGAGCGGGCTGAGGTACCTCCACTCGCACAAGATCATACACAGGGACATCAAGCCATCGAACCTTCTAGTAAACGGGAAGATGGAGGTGAAGATTGGGGACTTTGGTGTGAGCAAGGTGATGTGCAGGACTGTGGATGGGTGCAATTCATATGTGGGAACCTGCGCCTACATGAGTCCGGAGCGGTTCAACCCGGATTCGAATGGCGGGAACTATAACGGGTATGCGGGGGATATTTGGAGCTTGGGTTTGACCCTGTTTGAGCTCTATGTGGGTCACTTCCCCTTCCTTCGGGTGGGCCAGAGAGCCGACTGGGCCACCCTTATGTGCGCCATTTGTTTCGGGGATCCCCCCACCTTGCCACCAGAGGCTGCGTCGGCAGAGTTTCGGAGTTTCATTGGGTGTTGCTTGAATAAGGACTCCAATCAGCGCTGGACCGCATCTCAGCTCTTGACCCACCCTTTCCTCACTACTCACTAG 936 0.5737 MEESFVRDRRQVNLRLPLPEPRTSFPLPFPLPPPPAASAAIGPNDIEKLHVLGHGNGGTVYKVRHKRTSAVYALKIIHADSDPVTRSQIRREMDILQRTDSPHVVQYHGFFEIASGDVAIVMEYMDLGTLETMLKKKGTFSETQLAGVARQVLSGLRYLHSHKIIHRDIKPSNLLVNGKMEVKIGDFGVSKVMCRTVDGCNSYVGTCAYMSPERFNPDSNGGNYNGYAGDIWSLGLTLFELYVGHFPFLRVGQRADWATLMCAICFGDPPTLPPEAASAEFRSFIGCCLNKDSNQRWTASQLLTHPFLTTH. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07014 311 Gene3D Transferase(Phosphotransferase) domain 1 128 311 - -
Seca12g07014 311 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 42 309 - -
Seca12g07014 311 ProSitePatterns Protein kinases ATP-binding region signature. 52 75 IPR017441 GO:0005524
Seca12g07014 311 SMART serkin_6 46 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g07014 311 CDD PKc_MAPKK_plant_like 44 309 - -
Seca12g07014 311 Gene3D Phosphorylase Kinase; domain 1 35 126 - -
Seca12g07014 311 FunFam Mitogen-activated protein kinase 2 127 311 - -
Seca12g07014 311 SUPERFAMILY Protein kinase-like (PK-like) 44 309 IPR011009 -
Seca12g07014 311 ProSiteProfiles Protein kinase domain profile. 46 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g07014 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Seca12g07014 311 Pfam Protein kinase domain 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07014 Seca-Chr12 162058874 162059809 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07014 4 308 MAP Kinase Kinase Gene Family AT1G73500 60.518 5.74e-129 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Seca12g07014 Pkinase 1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07014 K20604 - qsu:112003150 465.692