Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07013 ATGCCGCGTCATTGCAAGCATTTGTTCATAGTATTGTCCCTACTTTCTTCGGCTGTAGGAAGCCAAGCAACCATAACAGCCTGCTTCTCCATCATTAACCAGTGCCTGGCATTAAATTGCTTCCCCAGAGTAAAAGTTATTCACACATCAAAAACGATACATGGACAGATTTACATCCCTGATGTCAACTGGTTATTGATGATTTTCAGTCTCACTGTCACAGTTAGTTTCAGAGACCTTGTGAAGATTGGCAATGCAACAGGTTTGGCTATAATTTGTGGAATGCTAGTGACAACTAGTCTGATGTCACTAATCATTGCTCTGTATTGGGAGAAGAATTTGATTGTATCCGCGTGCTTTCTTGTATTTTTTGGCTTTCTTGAGGCTGCATATCTTTCAGCATGTTTGCTACAATTTCACAAGGGAGCTTGGTATCTAATTGTCCTTTTGGCAGTGTCCATGACAATTATGCTTTCATGGCATTATGGAACTATGAAGAAGTATGAGTTTGATTTGCAAAACAAGGTGTCAACTGAATGGCTAATAGATATTAGTCCAGGCCTTGGAATTTCCAGGGTACCTGGAATTGGCTTCATTTACACTGACATAGTTGCAGGAATCCCAGCTTTCTTCTCGCATTTTATTACTAATCTTCCTGCATTTCATCAAGTGTTGATCTTGGTGTCCTTCAAGTCTATACCGGTGCCTTATGTCCCAGAAAGTGAAAGGTATCTCATAGGTAGGATTGGACCAAGAGATTATAAAATTTATCGTTGCATTGTCAGATGTGGATATTGTGATCATATCAGGGATACGGGTGATTTTGAGGAGCAAATTATCCGTTCTATAGGAGAATTCATTTCCATCGAACAGAGTGACATTGAATCCATGGTTTCCCCAGATGAAAGAATGATAGTTGTTGGAAATTCAGCACCAGATGGAAATGCTTTAGTTCCTCTGGATGAAATTGACTCGTGCATGGGGACAAAGCTGGTGAACAATGAATCTCAGATTAGCCCAGTTCGTGGTGATATATTGGGGAGTAGTAGTCGTGCTTGCAAGAAAAAAAAGGTTCGGTTCATGTTGCCTGCTAATAGTCCTAAAATGCAGCAATCTGTCAGGAAGGAGCTCTTAGAATTAATTGATGCCAGGGAGAGTGGTAGTGCCTATTTCTTGGGCCAGTCACATTTAGTGGTCCGTGATGGTTCAAACTTTCTCAAGAGATTCTTTATCATGGCCTATCGTTTCAGTGAAAAAAATTGTCGAGAACCTCCAGTGGCTCTAAAAATCCCTCATGCTGCTCTTGTAGAAGTTGGCATGGTATGTAGTATATAG 1335 0.4067 MPRHCKHLFIVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTIHGQIYIPDVNWLLMIFSLTVTVSFRDLVKIGNATGLAIICGMLVTTSLMSLIIALYWEKNLIVSACFLVFFGFLEAAYLSACLLQFHKGAWYLIVLLAVSMTIMLSWHYGTMKKYEFDLQNKVSTEWLIDISPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESERYLIGRIGPRDYKIYRCIVRCGYCDHIRDTGDFEEQIIRSIGEFISIEQSDIESMVSPDERMIVVGNSAPDGNALVPLDEIDSCMGTKLVNNESQISPVRGDILGSSSRACKKKKVRFMLPANSPKMQQSVRKELLELIDARESGSAYFLGQSHLVVRDGSNFLKRFFIMAYRFSEKNCREPPVALKIPHAALVEVGMVCSI. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07013 444 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 2 442 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g07013 444 Pfam K+ potassium transporter 2 266 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g07013 444 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07013 Seca-Chr12 162056653 162058609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07013 11 441 Inorganic Solute Cotransporters AT3G02050 47.273 2.59e-137 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07013 K03549 K12236 gmx:100801073 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g07013 12 162056653 162058609 Seca12g07013 12 162056653 162058609 ECH