Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07012 ATGGCTTCTCCAGTACTGCATCCTGATGAAATCTTTGATGAAGATGAGTTCAAGAAGAAAACATGGAAGCAAACAATTCTGCTGTCATTTCAAATTATTGGAATAGTTTATGGTCAACTGAGCACTGCACCTTTATATGTATTCGGGACAATGCGAGAGGGAGATCTTGCATCAGAGGAGGTCGTTTATGGACTCTTCTCCTTCATTTTCTGGAGTCTCACCATCATTTCTTTGCTCAAATATGCCGTTATAGTGCTGAAAGCCGATGATAAAGGAGAGGGTGGTACTTTTGCTTTATACTCACTCTTGTGTAGAAATGCAAAAGTTGGCTTGTTCCCATGTGATACAACAGCCAAAGAGGTCATGCTTTATGAGGAGAGAGGTCCTTCTAAGATCAATGGCAATGCTGATTCAAGAGCACGAAGGGCCATTGAGAAACACAAGATCGCTCACTATCTAATACTCTTCTTAGCCCTCTATGGTTCCTGTATGACAATTGGGGACGCAGTACTCACTCCAGCACTTTCAGTTTTATCAGCTTCAACGGGGGTTCAGAGATCCCTGTCAGACATGGCACACATATGTAAGACCTTGTCACTCATGATATTAGAAATAAAAACCATAGTTTTTTTTTGGTGA 639 0.4131 MASPVLHPDEIFDEDEFKKKTWKQTILLSFQIIGIVYGQLSTAPLYVFGTMREGDLASEEVVYGLFSFIFWSLTIISLLKYAVIVLKADDKGEGGTFALYSLLCRNAKVGLFPCDTTAKEVMLYEERGPSKINGNADSRARRAIEKHKIAHYLILFLALYGSCMTIGDAVLTPALSVLSASTGVQRSLSDMAHICKTLSLMILEIKTIVFFW. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07012 212 Pfam K+ potassium transporter 30 203 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca12g07012 212 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 203 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07012 Seca-Chr12 162053771 162055331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07012 18 193 Inorganic Solute Cotransporters AT2G40540 48.619 7.66e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07012 K03549 K12236 gmx:100801073 297.36