Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g07006 ATGAAAAGGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCTGTTTCCAGGGAAGAAAAGAAGAAGAGGGTTTATGAACTCCTTGATACACTGGGATTACAGAGTGCTACACATACCTATATTGGTGACGAGGGAAGGAGAGGAGTGTCAGGAGGGGAACGGCGAAGGGTATCCATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTTCTGGACGAACCAACCTCAGGACTTGATTCAACAAGTGCTTACAGTGTAGTGGAAAAGGTTAAAGACATAGCTCGAGGTGGTAGCATTGTCCTTATGACCATACATCAGCCTTCATTTAGAATTCAAATGCTGCTGGACAAGATAACAGTCCTTGCAAGGGGGAGGCTGATATACATGGGAAGGCCAGATGCACTTCAGGCTCACCTTTCTGGATTTGGAAGGCCAGTACCTGATGGAGAAAACAGTATTGAATATCTTCTAGATGTTATAAGTGAATATGATCAAGCAACAGTTGGGCTTGACCCTCTTGTCCAATACCAACGTGATGGCAATAAGCCTGACGCAGCAGCCATGACACCTGTTCGAAAAACTCCAAGAACACCTTACAGAAGGAACACTCCTGCATCTAAACACATGATTAGTCTACGCAGCCAAGGATTTACTGCTGGAACAGCACAACCTGATTCTTCACAGTTTGGTTATAACGATGAGGATGATGATGACGATGATGAGAACTTTGATAACTCCCTTGAAAGGAGAAGTGCTCAAACACCAAGGAACATCATGACTAGTGGTGTTTACCCACGCTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCTAAAGATTTCTCTGTCTGGCTCTATCATGGTGTAGTAGGAACCCCCCGTCGCCAACCATCATGGACTCCAGCAAGAACTCCAGGATGGACACCTGGGGCTGGGAAAACACCCATGTCAGGACCAAGAAGTGTCATTTCAAACCAACATTCTGCAGCTTATCAGGATCCATATCGCCCCAAAACTCCTGCAGTGGTTAGCCAGTCTATGGACTACTCTGCAACTTCATATGCACCTTCCTATGAAGAGTTTGAGATTGAGGAAGTGCTTGATGAGCCAAACCTTGGACCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGTAGTGCTTTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTGCTAACTGTTATGGCACTTGTCCTGTCCACCATTTTCAAAAGACTTAATCATAATAGTTTCAAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTCTCCTCCAATGATGCAGTGCCATCTTTTATCATGGAAAGGTTTATCTTCATCAGGGAGACTTCCCACAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCTGTTCAAGGCCTCACATTTGCCGCCATAACCAAATTAATGCTCCGCTTGCAAAGCAGCCTATTCCATTTCTGGATGATACTTTATGCCTCCCTCATTACTACCAATGCATATGTGATGCTTGTCAGTGCACTTGTGCCTAGTTACATAACAGGGTATGCAGTAGTTATTGCCACAACAGCACTCTTCTTTTTGACATGTGGTTTCTTCCTCAAGCGAACTCAGATACCCCCTTACTGGAAGTGGCTCCACCAAATTTCTGCAATCAAATACCCATTTGAGGCATTGCTGATAAATGAATTCAAAAATGACCGTGGCTGCTACACAGGAGAAAAAGCAGATTTATCCCCTGGACCATTAGGAGACGTGAAGCTCAGTAAACATCATAACGCTACTCTGCCCCCTAACTGCTTATTAGGAGAAGATATCTTGTCCACAATGGATATTACAATGGAAAACCTATGGTTTGACATCTTAATCCTGCTAGCTTGGGGTGTTCTTTACAGGCTCTTCTTCTATTTGGTTTTGAGATTCTACTCCAAAAATGAGAGAAAATGA 2088 0.4368 MKRVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSVSREEKKKRVYELLDTLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDKITVLARGRLIYMGRPDALQAHLSGFGRPVPDGENSIEYLLDVISEYDQATVGLDPLVQYQRDGNKPDAAAMTPVRKTPRTPYRRNTPASKHMISLRSQGFTAGTAQPDSSQFGYNDEDDDDDDENFDNSLERRSAQTPRNIMTSGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPGWTPGAGKTPMSGPRSVISNQHSAAYQDPYRPKTPAVVSQSMDYSATSYAPSYEEFEIEEVLDEPNLGPKYANPWLREVVVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKRLNHNSFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAAITKLMLRLQSSLFHFWMILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPPYWKWLHQISAIKYPFEALLINEFKNDRGCYTGEKADLSPGPLGDVKLSKHHNATLPPNCLLGEDILSTMDITMENLWFDILILLAWGVLYRLFFYLVLRFYSKNERK. 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g07006 695 MobiDBLite consensus disorder prediction 199 227 - -
Seca12g07006 695 ProSitePatterns ABC transporters family signature. 70 84 IPR017871 GO:0005524|GO:0016887
Seca12g07006 695 Pfam ABC transporter 4 98 IPR003439 GO:0005524
Seca12g07006 695 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 161 IPR027417 -
Seca12g07006 695 Gene3D - 1 164 IPR027417 -
Seca12g07006 695 MobiDBLite consensus disorder prediction 316 340 - -
Seca12g07006 695 MobiDBLite consensus disorder prediction 239 276 - -
Seca12g07006 695 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 682 - -
Seca12g07006 695 Pfam ABC-2 type transporter 405 611 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g07006 Seca-Chr12 161999819 162003938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g07006 60 223 Calmodulin-binding Proteins AT2G36910 25.731 2.16e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g07006 K05681 - gmx:100819497 1159.44