Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06907 ATGGTCGAACGTGGCGGAGACCGTGGTGGATTTGGGTGTGGCTTCGGAGGTCGTGGACGCGGCGACAGGGGCCGTGATCGCCGCAGGGCTTCTGGAAGGTGCGATGAAGAGGATAAGTGGGTTCCAGTGACGAAACTGGGTCGTCTTGTGAAAGAGGGTAAGATCCGAAGCCTTGAGCAGATCTACTTTCACTCACTCCCAATCAAGGAGCACCAAATCGTGGACACCTTGGTTGGTCCCTCCCTCAAGGATGAGGTCATGAAAATCATGCCTGTTCAGAAGCAGACCCGTGCTGGTCAGTGA 303 0.5578 MVERGGDRGGFGCGFGGRGRGDRGRDRRRASGRCDEEDKWVPVTKLGRLVKEGKIRSLEQIYFHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQ. 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06907 100 FunFam 40S ribosomal protein S2 39 100 - -
Seca12g06907 100 MobiDBLite consensus disorder prediction 19 35 - -
Seca12g06907 100 Gene3D - 39 100 - -
Seca12g06907 100 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06907 Seca-Chr12 161041490 161041792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06907 36 100 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 86.154 3.00e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06907 K02981 - gmx:100797105 140.198