Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06830 ATGATTGTGGCAGCAATTGAAACATCTGTTACCGTTATTGAGTGGGTTTTATCAGAACTTTTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGATAAGATAGAGAATGAAATAGGAATTAGGATAATGGTGGAAGAGAGGGATTTGGGGAAGTTGAGCTACTTGGATATGGTGGTAGATGAGACCTTAAGACTCTATCCTGTTGTACCCTTACTGGTCCCTCATGAGTCTAGAGAAAAGAGATTTATCAAGAACAAAATAAATTATCAAGGAAAACAGTTTCAATCTATACCATTTGGTTCTGGTCGTAGAGCTTGCCTTGGGATTCAATTGGGTTTGATTATTGTTAGATTGGTTATAGCTCAATTGGTGCATTGCTTTAATTGGGAATTACCATGTAATGTTAGTCCTGCCAACTTGAATATGGAGGAGAAATTTGGACTCTCAATACCAAGAGCTCAGCAGCTGCATGCAGTACCAACTTATCGTTTAGCTACTGATGCTTCCACCTCAACCCAGAATTTGGGTCCTCAGAACTCAAACAATCATGCAAAAACGGAGAATAATCAAGTGGGGAAAAGGGAAAAAGAGAAGGGGAGCAATCCACGGTGGGGTGACCATGGCAACTGTAGCAGCCGCGCGTGGCTCAACGGTGGCCGCGACAGTGAGATCGCGGCGCGACGTAGCACGGTGGAGGCGAAAAGGAAGAACGTTGAAGCTACTGTACGACCGCGAACAGGGGGCGGCGTGCGACTGCGCAAACGATGGTCGTCGGGGTTGGCTCCTGCAGCGGAGAAAGGAGACGGCCACACGGCGGTAGCCGTGCGGGGCAGACAGCGGAGGCGGGTGGCTCCTACGGCGGAGAAGGGAGACGACCTAGGTGGAGGAGGGACGGCCAGAAGCGGTGGCTGTGTGCGACGAGCCCAGCGGTGGCTGGATCCATTAACTTCGACCACAGTTTGA 963 0.4922 MIVAAIETSVTVIEWVLSELLRHPRVMKILQDKIENEIGIRIMVEERDLGKLSYLDMVVDETLRLYPVVPLLVPHESREKRFIKNKINYQGKQFQSIPFGSGRRACLGIQLGLIIVRLVIAQLVHCFNWELPCNVSPANLNMEEKFGLSIPRAQQLHAVPTYRLATDASTSTQNLGPQNSNNHAKTENNQVGKREKEKGSNPRWGDHGNCSSRAWLNGGRDSEIAARRSTVEAKRKNVEATVRPRTGGGVRLRKRWSSGLAPAAEKGDGHTAVAVRGRQRRRVAPTAEKGDDLGGGGTARSGGCVRRAQRWLDPLTSTTV. 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06830 320 PANTHER CYTOCHROME P450 93A3-LIKE 80 165 - -
Seca12g06830 320 SUPERFAMILY Cytochrome P450 1 163 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 99 108 IPR017972 GO:0005506|GO:0016705
Seca12g06830 320 PRINTS P450 superfamily signature 97 106 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 PRINTS P450 superfamily signature 106 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 MobiDBLite consensus disorder prediction 188 203 - -
Seca12g06830 320 MobiDBLite consensus disorder prediction 169 187 - -
Seca12g06830 320 MobiDBLite consensus disorder prediction 278 302 - -
Seca12g06830 320 Gene3D Cytochrome P450 81 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 PRINTS E-class P450 group I signature 96 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 PRINTS E-class P450 group I signature 106 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 Gene3D Cytochrome P450 1 80 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 Pfam Cytochrome P450 80 153 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 Pfam Cytochrome P450 1 77 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06830 320 MobiDBLite consensus disorder prediction 169 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06830 Seca-Chr12 160252593 160254848 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06830 7 164 Monolignol Biosynthesis Gene Families AT4G36220 37.436 2.60e-38 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06830 - K20562 psat:127113357 211.46