Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06826 ATGTCTTTTGCAGCAGACATAGCACTCTATACTTTCCTTCTCTTCACTTTCATGTATCTTGTATACACACTCTTCTTCCGTCCTAATCTGAAAGTTCCACCAGGTCCACCTGCGTTGCCAATCATAGGTAATCTCCACATGTTGGGTACCCTTCCACATCGCACACTTGACTCCCTTTCCAAAAAATATGGCCCTATCATGTCCTTGCAATTGGGACAAGTCCCAACTATTGTGGTTTCCTCCTCTAACGCTGCTGAGTCATTTCTCAAGACCCACGACATCGTTTTTGCAAGCCGCCCAAAGGTTCAAGCATCTGAGCTCATGTCCTACGGCTCCAAAGGCATGGCTTTCTCTGAGTATGGTCCATACTGGCGTGGCGTCAAGAAACTCTGCACGTCGCAACTTCTTAGCCCATCAAAAATTGACCTCTTTGCTCCTATTAGGAGGGAGGAGATTGGTCTAGCAGTCAAGTCACTAGAGAAATCTGCAGCTTTGGGTCAGGTTGTGAATCTTAGCGAGGTTGTAGAGAACCTTATAGAGGATATAGTGTATAACATGATTCTGGGTCGCAGTAAATATGACCAATTCGACTTAAAGAGGCTAATTCAAGAAGCAACCAGATTGGTTGGAGCTTTTAATCTCGCAGACTATGTGCCTTTGCTTGGCGCATTTGACCTTCAGGGATTAACTTGGGACTGCAAGAAAACTAGTAAAGCAATTGATGAGATACTGGAGAAGATAATAACAGAGCATGAACAAGTTGTTGCCCAAGTAGGAGAAAGGGATCATAAAGACTTTGTAGACATACTCCTCTCAATGATGCACCAACCTCTGAGTGAACAAAACCATGTCATCGATCGAACTAACATCAAGGCTATTTTACTAGATATGTTCGTGGGGGCAATTGAAACATCTGCTACCGTAATTGAGTGGGCTTTATCAGAACTTTTGAGGCATCCAAGGGTGATGAAAATCCTTCAAGAAGAGATAGAGAATGAAGTAGGAATTGGGAGAATGGTGGAAGAGAGGGATTTGATGAAATTGAATTACTTGGATATGGTGGTGGATGAGACCTTAAGATTATATCCTGTTGGACCCTTACTTGTCCCTCGTGAATGTAGAGAGAGCATCACAATTGATGGTTATTATATAAAGAAAAAGTCACGGATCATAATAAACGCATGGGCAATAGGAAGGGATCCTGATGTATGGTCAGATTCTGAAACATTTTATCCAGAGAGGTTTATCAAGAAGAAAATAAATTATCAAGGACAAGACTTTAGATCTATACCATTTGGTTCTGGTCGTAGAGCTTGTCCTGGGATTCAATTGGGTTTGATTACTGTTAAACTGGTTCTAGCTCAATTGGTGCATTGCTTTAATTGGAAACTTCCACTTAATGTTAATCCTTCCAACTTGAATATGGAGGAGAAATTTGGACTTTCAATTCCACGAGCTCAACAGTTGTACGCAGTACCAACTTATCGTTTAGCTAATGATGCGAAGCAAGAATAG 1515 0.4165 MSFAADIALYTFLLFTFMYLVYTLFFRPNLKVPPGPPALPIIGNLHMLGTLPHRTLDSLSKKYGPIMSLQLGQVPTIVVSSSNAAESFLKTHDIVFASRPKVQASELMSYGSKGMAFSEYGPYWRGVKKLCTSQLLSPSKIDLFAPIRREEIGLAVKSLEKSAALGQVVNLSEVVENLIEDIVYNMILGRSKYDQFDLKRLIQEATRLVGAFNLADYVPLLGAFDLQGLTWDCKKTSKAIDEILEKIITEHEQVVAQVGERDHKDFVDILLSMMHQPLSEQNHVIDRTNIKAILLDMFVGAIETSATVIEWALSELLRHPRVMKILQEEIENEVGIGRMVEERDLMKLNYLDMVVDETLRLYPVGPLLVPRECRESITIDGYYIKKKSRIIINAWAIGRDPDVWSDSETFYPERFIKKKINYQGQDFRSIPFGSGRRACPGIQLGLITVKLVLAQLVHCFNWKLPLNVNPSNLNMEEKFGLSIPRAQQLYAVPTYRLANDAKQE. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06826 504 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 CDD CYP71-like 62 489 - -
Seca12g06826 504 PANTHER CYTOCHROME P450 93A3-LIKE 11 498 - -
Seca12g06826 504 FunFam Cytochrome P450 83B1 23 492 - -
Seca12g06826 504 Gene3D Cytochrome P450 27 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Seca12g06826 504 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06826 504 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06826 Seca-Chr12 160233587 160235213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06826 27 493 Cytochrome P450 AT3G26330 40.966 1.36e-128 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06826 - - psat:127113357 702.59