Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06825 ATGTCTTTTCCAACGATTGTTTTCCTTCTCTTCACTTTCATATATCTGCTATACACAATTTTCTTTCATCCAAAACAAAGAAATGTTCATGGGAAAAAACCACCAGGTCCAGCAATGCTGCCAATTATGGGAAACCTCCACATGTTGGGTAGCCTTCCACATCGCTCACTTCAGTCTCTGTCCAAAAAATATGGCCCTATCATGTTCTTGCAATTGGGACAAGTCCCAACTATTGTGGTTTCCTCCTCTCAGGCTGCTGAGTTATTTCTTAAGACCCACGACGTCGTTTTCGCAAGCCGGCCAAAGATACAAGCATGTGAACTCCTGCTCTACGGCTCCAAGGGCTTGGCGTTTTCTGAGTATGGTCCATACTGGCGCAACATGAAGAAACTGTGCACTTTGCAACTTCTTACCACTTCAAAAATTGAACTCTTTGCTCCTATTAGAAGGGAGGAGTTAGCTCTAGTGGTGAAGTCATTGGAAAAAGCAGCAGCGGTGTGTCAGGTTGTGAACCTTAGCGATATTGTAGAAAACCTTATAGAGGATATAATGTATAAGATGATGTTGGGTCGCAATAGGTACGACCAATTTGACTTAAAGAGGCTAGTCCGTGAAGCATTGACAATGGAGGGAGTTTTTAATCTCGCAGATTATGTGCCTTGGCTAGGCCCCTTTGATCTTCAGGGATTCACACGGGACTGCAAGAAAATTAGTAAAGAACTTGATGAGATACTAGAGATGATAATAACAGAGCATGAACAAGATGCTAATGTAGACACGAGACATCGTAAAGACTTCGTAGACATATTGCTCTCAATGATGCATCAGACAATAGATCCCTTAAGTGAACAAAACCATATCATTGATCGAACTAACATTAAGGCTGTTTTACTAGATTTGATTAACGCAGCAGTTGAAACATCTGCTACCGTGATTGAGTGGGCTTTATCAGAACTCTTAAGGTATCCAAGGGTGATGAAGAACCTTCAAGATGAGATAGAAAATGAAGTAGGAATTGGAAGGATGGTAGAAGAGAAGGATTTGATGAAGTTGAGTTACTTGGATGCAGTGGTTGATGAAACCTTTAGATTGTATCCTGTTGGACCATTACTAATCCCTCGTGAATGCAGAGAGAGCATCACAATTGATGGTTATTATATACAGAAAAAGTCACGAATCATAATAAACGCATGGGCAATAGGGAGGGATCCTAATGTATGGTCTGATGCTGAAACATTTTATCCAGAGAGGTTTATTAAGAAAAATATAAATTACTTGGGACAAGACTTTCGATCTATACCATTTGGTTCTGGTCGTAGAGCTTGCCCAGGGGTTCAATTGGGTTTGATTACTGTTAAACTGGTTATAGCTCAATTGGTGCACTGCTTTAATTGGGAACTTCCACCTAATGTTAGTCCCGCCAACTTGAATATGCAGGAGAAATTTGGACTGGCAATACCAAGAGCTCAGTCGTTGCATGCAATACCATCTCATCGTTTAGCTAGCGATGCTCAACATGAATAG 1524 0.4094 MSFPTIVFLLFTFIYLLYTIFFHPKQRNVHGKKPPGPAMLPIMGNLHMLGSLPHRSLQSLSKKYGPIMFLQLGQVPTIVVSSSQAAELFLKTHDVVFASRPKIQACELLLYGSKGLAFSEYGPYWRNMKKLCTLQLLTTSKIELFAPIRREELALVVKSLEKAAAVCQVVNLSDIVENLIEDIMYKMMLGRNRYDQFDLKRLVREALTMEGVFNLADYVPWLGPFDLQGFTRDCKKISKELDEILEMIITEHEQDANVDTRHRKDFVDILLSMMHQTIDPLSEQNHIIDRTNIKAVLLDLINAAVETSATVIEWALSELLRYPRVMKNLQDEIENEVGIGRMVEEKDLMKLSYLDAVVDETFRLYPVGPLLIPRECRESITIDGYYIQKKSRIIINAWAIGRDPNVWSDAETFYPERFIKKNINYLGQDFRSIPFGSGRRACPGVQLGLITVKLVIAQLVHCFNWELPPNVSPANLNMQEKFGLAIPRAQSLHAIPSHRLASDAQHE. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06825 507 PANTHER CYTOCHROME P450 93A3-LIKE 11 500 - -
Seca12g06825 507 FunFam Cytochrome P450 83B1 20 495 - -
Seca12g06825 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca12g06825 507 CDD CYP71-like 63 492 - -
Seca12g06825 507 Gene3D Cytochrome P450 21 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06825 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06825 Seca-Chr12 160221596 160225751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06825 6 503 Cytochrome P450 AT5G07990 38.627 3.80e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06825 - - psat:127113357 733.021