Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06794 ATGCAATTCACTAGTAACTCTGGAAATCACCATGCAGTGAACTTCAACACCTCTAGAGGGTTTCTCACCAAACTCAAAATAGGAGTCAAAGAAACGTTTTTCCCTGACGATCCCTTTAGGCATTTCAAAAATAAAGACAAGCCACTATTCAAAGGGGTCCAGTATTTCGTCCCAATCTTTGAGTGGCTCCCCACTTACACTTGGCGCATGTTTTACTCTGACTTCCTCGCCGGCCTCACCATCACCAGCCTCGCTGTCCCTCAAAGCATTAGCTTTGCCAAACTCGCCAACCTTCCTCCCATTATTGGCCTATATAGCAGCTTTGTCCCACCTCTTGTGTATGCTATTTTTGGGAGTTCAAGGCACATATCAGTGGGGACGACAGCTTCATTATCAATGCTTATATATCAAAATGTTTCAACCCTTGCAAATCCAGAAGAAGACCTAAACCTCTATATTCATCTGGTTTTCACAACTACCTTTATTGCTGGCGCCTTCCAGGCTTGTTTGGGTATTCTCAGGTTGGGGATATTGGTGGATTTCTTGTCCGGTCCTACCATCACTGGCTTCATCGGAGGGTCAGCAACAATTCTCGGCGTCCAACAACTAAAGGGCATTTTCGGTATCAAATATTTTTTGGGTAAAATGGATCTCATAACACGGTTGAAGGGCTTATGGACCCGAAGACACGAGATGAAGTGGGAGCCCACAGTTCCGGGTGTGATCTTCCTTATTTTCCTGCAGTTTACTAAATACTTGAGGAATAAGAGCCCAAAACTCTTTTGGTTATCAGCTTTAGCTCCAATGACAACTGTCATAATTGCTGGTGTCTTGACTTATTACCCCATTGATGGACAAAGACGTGGGATTCAAATGGTGGGTCATGTAGACAAAGGAATAAATCCTTTTTCCATCCAGAATTTTAACTTTGACAGTAAATATTTACCTGTGATATTGAAAGCTGGTTTTATCACAGGCGTACTATCACTGGCTGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTTGTTAAAAACACACCTCATGATGGGATCAAAGAGATGATAGCTTCTGGTCTTATGAACTTATGTGGTTCTTTTACTTCATGTTACATGACTACCGGAACATTTTCCAAAACGGCTGTGAATTACAGCGCAGGGTGTGAAACAGCCATGTCAAACATAGTTCAGGCGTTCCTAATGGCACTCATTTTGAAGTTTTTGACACCATTTATTGGTTACATCCCTCTTTTTGCTCTATCAGCTATTACAGTCTCCGCCGTGATGGGGTTGATTAACTATACCGAAGTTATTTACTTTTATAAAGTTGACAAGTTTGATTTTATTATTTGCATGACGGCCTTTCTTGGTGTAATCTTCATAGCCTCGGATGTTGGCTTCATGTTGTCAGTTGGTCTTAGTGTGCTTAGGGCACTCTTACATGTGGCTAGGCCTGCGGCATGTAAGCTTGGAAAGTTACCTGACTTGGATATATATCGAGATGTTGAGCAGTATAGTGTTTCAACATTCCCAGGTGTTCTAATTCTACAACTTGGTTCTCCCATTTACTTTGCAAATTCTTCCTACATCAAAGAAAGAATCATGAGGTATATTCGAAGCGAGCAAGAATCTAATGGACAAATTGTTGAGCAGATCATACTCGATTTGTCAGGAGTGACATCCATTGACACCACGGCTATTGAAGTATTGTTGGAAATAAATAAAATCTTGGAAAGGAATGGAATCAAGATGTCATTAGTAAACCCGAGTATGGAAGTTTTGGAGAAACTGATATCATCCAAGTTTGTTGACAAGATTGGGAAGGAGAAATTTTTTCTCACATTGAAAGATGCAGTAAACGCAAGTCAATTCTCATTTTGTAAATCGAAGACAAATGATCTTGAAAAGATAGTTGGAGAAATAAATATTGTCTAG 1932 0.4053 MQFTSNSGNHHAVNFNTSRGFLTKLKIGVKETFFPDDPFRHFKNKDKPLFKGVQYFVPIFEWLPTYTWRMFYSDFLAGLTITSLAVPQSISFAKLANLPPIIGLYSSFVPPLVYAIFGSSRHISVGTTASLSMLIYQNVSTLANPEEDLNLYIHLVFTTTFIAGAFQACLGILRLGILVDFLSGPTITGFIGGSATILGVQQLKGIFGIKYFLGKMDLITRLKGLWTRRHEMKWEPTVPGVIFLIFLQFTKYLRNKSPKLFWLSALAPMTTVIIAGVLTYYPIDGQRRGIQMVGHVDKGINPFSIQNFNFDSKYLPVILKAGFITGVLSLAEGIAIGRSFSVVKNTPHDGIKEMIASGLMNLCGSFTSCYMTTGTFSKTAVNYSAGCETAMSNIVQAFLMALILKFLTPFIGYIPLFALSAITVSAVMGLINYTEVIYFYKVDKFDFIICMTAFLGVIFIASDVGFMLSVGLSVLRALLHVARPAACKLGKLPDLDIYRDVEQYSVSTFPGVLILQLGSPIYFANSSYIKERIMRYIRSEQESNGQIVEQIILDLSGVTSIDTTAIEVLLEINKILERNGIKMSLVNPSMEVLEKLISSKFVDKIGKEKFFLTLKDAVNASQFSFCKSKTNDLEKIVGEINIV. 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06794 643 CDD STAS_SulP_like_sulfate_transporter 508 614 - -
Seca12g06794 643 Pfam Sulfate permease family 71 452 IPR011547 GO:0016020
Seca12g06794 643 Gene3D STAS domain 483 624 IPR036513 -
Seca12g06794 643 SUPERFAMILY SpoIIaa-like 503 620 IPR036513 -
Seca12g06794 643 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Seca12g06794 643 Pfam STAS domain 506 617 IPR002645 -
Seca12g06794 643 NCBIfam sulfate permease 58 617 IPR001902 GO:0016020|GO:0055085
Seca12g06794 643 ProSiteProfiles STAS domain profile. 502 621 IPR002645 -
Seca12g06794 643 PANTHER SULFATE TRANSPORTER 28 624 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06794 Seca-Chr12 159895461 159900564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06794 4 629 Inorganic Solute Cotransporters AT5G19600 55.238 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06794 K17471 - gmx:100789107 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06794 12 159895461 159900564 Seca12g06794 12 159895461 159900564 ECH