Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06779 ATGTTCCGATCCTCATTCGGTTCTTGCAGGACCCGAAACTTAACCGATGTTATGGAAAAAGCAGTATTTGCACCACCCAACAACCAGAACCGTGCCGGTTTCCACCTCATTGACCCTCCTTCCCCAAAAACTAGACCTTTTCCCCCTATTTGCAGACCCAAAGGCTCAGAAACCATAAACGACCGTTGCATCGTGTCGTTTAAGGATTCTCACCCTAGACGCAAAATCTCTGAGTGGTCATCATCACCCTTTCTCTTGGGTGTTACTAATTGCCCCCCTGCTTCCCCTTTGAACACAATCCATGAGCATGACTTCGGTTTCTACGAGAAAAAAACAAAGGGTTCAGCCAGAAACGTTAGGAACAAGAAGAAAAAGAAGAAGAAGAAGCATGCCCAGAAGAAAACCAAGGCCAGAGACATGTTCCCTTTTAATTCTTGTGCTAAAGACACCAACTTTGATGGTTATTGGTGGTCTCGCCGCCGGCATCATTCTCGCCGGAAAAGTGACCGGAGCTCCGAGATGGGTGTTCTGCCCTTGAATGGGAAGGTGAAGGATACTTTTGCAGTGGTGAAGCGCTCGAGTGATCCTTACAATGATTTTAGGACATCGATGGTGGAGATGATAATGGAGAAGCAGATATTTTCGCCGGAGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCACTGAATTCGAATCATCATCACAAGATCATTGTTGAAGTCTTCACAGAGATTTGGGAAGCAATGTTTGCTGACTGGTTTTAA 765 0.4562 MFRSSFGSCRTRNLTDVMEKAVFAPPNNQNRAGFHLIDPPSPKTRPFPPICRPKGSETINDRCIVSFKDSHPRRKISEWSSSPFLLGVTNCPPASPLNTIHEHDFGFYEKKTKGSARNVRNKKKKKKKKHAQKKTKARDMFPFNSCAKDTNFDGYWWSRRRHHSRRKSDRSSEMGVLPLNGKVKDTFAVVKRSSDPYNDFRTSMVEMIMEKQIFSPEDLENLLQCFLSLNSNHHHKIIVEVFTEIWEAMFADWF. 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06779 254 MobiDBLite consensus disorder prediction 116 135 - -
Seca12g06779 254 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 98 250 IPR038933 GO:0045892
Seca12g06779 254 Pfam Transcriptional repressor, ovate 193 250 IPR006458 -
Seca12g06779 254 MobiDBLite consensus disorder prediction 113 136 - -
Seca12g06779 254 NCBIfam uncharacterized plant-specific domain TIGR01568 187 249 IPR006458 -
Seca12g06779 254 ProSiteProfiles OVATE domain profile. 189 248 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06779 Seca-Chr12 159787178 159788016 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca12g06779 Ovate 5.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06779 - - gmx:100776613 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06779 12 159787178 159788016 Seca12g06779 12 159787178 159788016 ECH