Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06775 ATGTCATTTAGCGAAGCACATTGTGAGCCAATTGCCAACTCTTCCCTTCAATTGGGGAGACAACTCTTCATGCAGAGATCTCAAATTACTTCCATGTTTGGGGCAGAGTATCTTTGGGCGAATGGGTACACTGGTGCAAAAGTCAAAATGACAATATTTGATACTGGCATTAGAGCTAATCACCCTCATTTCCGTAACATCAAGCGTACAAATTGGACCAATGAGAACACATTGAATGATAATCTTGGACATGGGACCTTTGTTGTCGGTGTTGTTGCTGGTGTAGATGCAGGGTGTCTTGGTTTTACACCAGATACTGAGATTTATGCATTTCGTGTGTTCACTGATGCACAATGTCATCCTGAATCTAATCGAAAAAATATCTTAAACCCAACAAGTATGAAACAAGCATTGGTTGAGGGTGCTACAAAGCTTGGTGCTGGCAGAGTTGATTTTCACTCTATGCATGTTATTGGCTATGTTGAAGGTCCACTAACATGGCATCCTTCCAATGAAGAAGGGAATCTTTTAAGTATTCATTTTACATATTCAGAGTTAAAAGTGGTTCCAACACCACCACCATCAAAACGAGTTTTATGGGACCAGTTTCATAGTATTAAATACCCACCTGGTTATATTCCAAGAGACTCCTTGGATGTTCGCAATGACATTCTTGACTGGCATGGTGATCATCTGCATACAAATTTTCACATCATGTTCAACATGCTACGAGATGCTGGTTACTATGTTGAAACGCTTGGTTCTCCTCTTACATGCTTTGATGCTCATCAATATGGAACACTTTTGATGGTGGATCTTGAAGACGAATACTTTGCTGAGGAGATTGAAAAACTAAGAGACGATGTTGTAAATACTGGTTTGGGACTAGCTGTCTTTGCTGAGTGGTAA 909 0.4015 MSFSEAHCEPIANSSLQLGRQLFMQRSQITSMFGAEYLWANGYTGAKVKMTIFDTGIRANHPHFRNIKRTNWTNENTLNDNLGHGTFVVGVVAGVDAGCLGFTPDTEIYAFRVFTDAQCHPESNRKNILNPTSMKQALVEGATKLGAGRVDFHSMHVIGYVEGPLTWHPSNEEGNLLSIHFTYSELKVVPTPPPSKRVLWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDAHQYGTLLMVDLEDEYFAEEIEKLRDDVVNTGLGLAVFAEW. 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06775 302 PANTHER PEPTIDASE S8 32 119 - -
Seca12g06775 302 Gene3D Peptidase S8/S53 domain 16 172 IPR036852 GO:0004252|GO:0006508
Seca12g06775 302 PRINTS Subtilisin serine protease family (S8) signature 45 64 IPR015500 -
Seca12g06775 302 PRINTS Subtilisin serine protease family (S8) signature 80 93 IPR015500 -
Seca12g06775 302 SUPERFAMILY Subtilisin-like 30 118 IPR036852 GO:0004252|GO:0006508
Seca12g06775 302 Pfam Subtilase family 46 128 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06775 Seca-Chr12 159754192 159759657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06775 80 302 Subtilisin-like Serine Gene Family AT5G19660 46.765 1.46e-87 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06775 K08653 - twl:119997084 263.077