Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06749 ATGGTGAGAGTGATTCCCATGGCTTGTTCGATTCGACCTTCTCTCTCTTCCTTTAGGTTTTCAGCTGCTGCTTCTCGTTCCTCTCTTTCTCTCTTCAACCCCTCTTCTCGACTCTCTTTCTTCCATCTCTCCACCGCTGTTCCACAATCGAATAGTTTTGGCCTGAAAGCATCCAAGCTGTTCAGACAAGATGGTAGCTCCATGAGAGTCATGGCATCTGGGAACGTGTCCCAATCAGTAACACCTGCTTCATCAGAAAATGTACTAGATTGGGTCAAACAGGACGAGCGAAGAATGCTTCATGTTGTGTATCGTGTTGGGGACTTGGACAGGACCATAAAATTTTATACAGAGTGCCTGGGAATGAAACTCCTCAGAAAACGTGACATACCGGAGGAGAGATATACCAATGCCTTTCTTGGATATGGCCCTGAGGACTCACACTTTGTTATTGAACTGACATACAATTATGGAGTTGACAAGTATGATATTGGAACTGGATTTGGTCATTTTGGTATTGCTGTTGATGATATTGTGAAAACAGTGGAGCTAATAAGAGCTAAGGGTGGAAAAATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAAAACAGTAATTGCATTTATTGAAGATCCTGATGGTTACAAATTTGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCTCTGTGCCAAGTAATGCTTCGAGTGGGTGATCTTAACCGTTCCATAGAATTTTATGAGAAGGCTTTTGGGATGGAGCTGCTTCGAAAACGTGATAATCCAGAATACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTAGAGTTGACTTACAACTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCCATAGGAACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTAGTCGGGGGGAAAATTACTCGGGAACCTGGACCTTTACCTGGTATCAACACAAAAATTACTGCATGCCTGGATCCTGATGGTTGGAAGTCGGTATGTCTCTTCGAATTTTATGGTTTAATGTGTCAGAGACCAACTCTTTCAAAGGTTTAA 1101 0.4223 MVRVIPMACSIRPSLSSFRFSAAASRSSLSLFNPSSRLSFFHLSTAVPQSNSFGLKASKLFRQDGSSMRVMASGNVSQSVTPASSENVLDWVKQDERRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTGFGHFGIAVDDIVKTVELIRAKGGKITREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRKRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKSVCLFEFYGLMCQRPTLSKV. 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06749 366 Gene3D - 69 223 IPR029068 -
Seca12g06749 366 CDD GlxI_Ni 99 220 - -
Seca12g06749 366 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 229 346 IPR029068 -
Seca12g06749 366 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 228 352 IPR037523 -
Seca12g06749 366 FunFam Lactoylglutathione lyase 225 355 - -
Seca12g06749 366 ProSitePatterns Glyoxalase I signature 1. 231 252 IPR018146 GO:0004462|GO:0046872
Seca12g06749 366 PANTHER LACTOYLGLUTATHIONE LYASE 78 349 - -
Seca12g06749 366 ProSitePatterns Glyoxalase I signature 2. 165 177 IPR018146 GO:0004462|GO:0046872
Seca12g06749 366 Gene3D - 225 352 IPR029068 -
Seca12g06749 366 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 99 219 IPR004360 -
Seca12g06749 366 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 231 345 IPR004360 -
Seca12g06749 366 FunFam Lactoylglutathione lyase 95 224 - -
Seca12g06749 366 NCBIfam lactoylglutathione lyase 98 223 IPR004361 GO:0004462|GO:0046872
Seca12g06749 366 ProSitePatterns Glyoxalase I signature 1. 101 122 IPR018146 GO:0004462|GO:0046872
Seca12g06749 366 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 98 222 IPR037523 -
Seca12g06749 366 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 97 227 IPR029068 -
Seca12g06749 366 CDD GlxI_Ni 229 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06749 Seca-Chr12 159501067 159504789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06749 231 345 Calmodulin-binding Proteins AT1G08110 27.143 1.05e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06749 K01759 - gmx:100775714 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06749 12 159501067 159504789 Seca12g06749 12 159501067 159504789 ECH
Seca12g06749 12 159501067 159504789 Seca12g06749 12 159501067 159504789 PCT