Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06671 ATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGCATTTATCCTCTACAGAATGTGTTCATTCGCAAAGTTAAGATCCTGAAAGCTCCTAAGTTTGATCTTGGGAAACTGATTGAGCATTATGGCCACTCAGAATATGTTGGTATAAAGGTGGACAGACCTGCTGATGAAACAATGGTTGAGGGAGCCACCGAAGTTGTTGGAGCTTGA 210 0.419 MIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLIEHYGHSEYVGIKVDRPADETMVEGATEVVGA. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06671 69 Pfam Ribosomal S3Ae family 2 30 IPR001593 GO:0003735|GO:0005840|GO:0006412
Seca12g06671 69 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06671 Seca-Chr12 158773638 158774216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06671 2 69 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 77.143 1.21e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06671 K02984 - gmx:100781570 116.701