Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06659 ATGGCAGGTGCTATGAAGAAAGTCGACAAGATTCGCCAAATCGTTCGTCTAAAACAACTCATGATGCGGTGGAAGCACATTAGTCTCCGCCGCCGTTCCCTCCCCCCCGAACCGGAACCATGTTCCGCCGCTCGACGACCACCCTCCGGCTTCCTCTTCGTCTACGTCGGACCCGAACGCAAGCGTTTCGCCATCCCTGCACGCTTCCTTAACCTCCCCGTCTTCTCCGGTCTCCTCGACGAAACCGAGGAGGAGTTTGGGCTCCGAGGTAATGGTGGTTTGGTTCTGCCCTGTCAAGTGGGTTTCTTCAGACACATCATCAAGCATCTCCATAAGGACGAGCACAAGTACGGGAAACTCTCTCTGGAAGAGTTTGTTAAAATGTTCTCTGAGATGGCTTCAGATTATCCTTGCAAGGAAAACGTCGTCGTTTTTGTTCCTCTGTTGCAGAAAGCAGAGGTTTAG 465 0.5247 MAGAMKKVDKIRQIVRLKQLMMRWKHISLRRRSLPPEPEPCSAARRPPSGFLFVYVGPERKRFAIPARFLNLPVFSGLLDETEEEFGLRGNGGLVLPCQVGFFRHIIKHLHKDEHKYGKLSLEEFVKMFSEMASDYPCKENVVVFVPLLQKAEV. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06659 154 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 106 IPR003676 GO:0009733
Seca12g06659 154 Pfam Auxin responsive protein 16 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06659 Seca-Chr12 158674024 158674488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06659 7 128 Calmodulin-binding Proteins AT3G43120 30.719 5.74e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06659 K14488 - gmx:100797463 223.787