Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06623 ATGGATTGTGATTCTCTTGGACTTGCACTTGTTAAGCTTTTCTTCTGTGCTTATTATTTAGTCATCTACTTGTTATGTTTTTTGTGCCTGAGCTACATTCACCTTTTCTATTACCTTCAGAAACAGAATCAGGAATTTTCAGGCAGATTTTACATGGAGAGTTTGATTTTGTATCTGAACCGTAGTATCTCAGAAAGTGCTAAAGATTTGGTAAAACAGATGTTGGAAAGGGACCCTACAAAAAGACCTTCTGCTCATGAAGTCTTATGTCACCCTTGGATTGTTGATGATACAGTTGCCCCTGACAAACCTCTGGATTCAGCTGTTTTGACACGCCTAAAGCATTTCTCGGCAATGAATAAACTCAAGAAGATGTCACTACGTGATTCTGGTCTTCTCGAAACAGTAGAATACATGGTTTTAGATTCCTTGGAGAGCCTGAAGAGCCGTAATTTGTTTAGTATTAAAAAAATCAAAGCTGTCTGGTAG 489 0.3804 MDCDSLGLALVKLFFCAYYLVIYLLCFLCLSYIHLFYYLQKQNQEFSGRFYMESLILYLNRSISESAKDLVKQMLERDPTKRPSAHEVLCHPWIVDDTVAPDKPLDSAVLTRLKHFSAMNKLKKMSLRDSGLLETVEYMVLDSLESLKSRNLFSIKKIKAVW. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06623 162 Gene3D Transferase(Phosphotransferase) domain 1 3 136 - -
Seca12g06623 162 Pfam Protein kinase domain 57 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g06623 162 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g06623 162 PANTHER SERINE/THREONINE-PROTEIN KINASE 61 140 - -
Seca12g06623 162 SUPERFAMILY Protein kinase-like (PK-like) 18 120 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06623 Seca-Chr12 158292160 158292911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06623 62 128 EF-hand Containing Proteins AT5G23580 79.104 4.79e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca12g06623 Pkinase 7.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06623 K13412 - jre:109011806 122.094