Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06565 ATGGGGAAGAAAATGGCCAAGAAAATACACATTAGTTTCTTTATCTTTGCAATGATTGGATTCATTATGATGGTATCTGTGAGTTCAACGACAACTCACATTGTTGGAGACCATGCGGGTTGGAGTTTGCCCAGTTGCCAAGAGTTCTATGAGGACTGGGCCAAGAAAAGAACCTTCGCAATTGGCGACGTACTTCTTTTCAAGTACAACCCTGGGTTGAACACTGTAGTACAGGTAAACAAGGAGGACTACGAGTGTTGCACTACCAAAAATACCATCCATACATACTTCGATGGGAACACCGCTTTTACTTTGGACAAAGCCGGGGACTATTTTTTCTTTAGTTCCGTAGGCAGGCACTGTGAGGTAGGCCTAAAGCTCCGGGTTACTGTTCCTCAGGGAAAGCACCCTTCTCATTAA 420 0.4429 MGKKMAKKIHISFFIFAMIGFIMMVSVSSTTTHIVGDHAGWSLPSCQEFYEDWAKKRTFAIGDVLLFKYNPGLNTVVQVNKEDYECCTTKNTIHTYFDGNTAFTLDKAGDYFFFSSVGRHCEVGLKLRVTVPQGKHPSH. 140
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06565 139 CDD Phytocyanin 31 131 - -
Seca12g06565 139 SUPERFAMILY Cupredoxins 31 132 IPR008972 -
Seca12g06565 139 ProSitePatterns Multicopper oxidases signature 1. 109 129 IPR033138 -
Seca12g06565 139 FunFam Cupredoxin superfamily protein 30 136 - -
Seca12g06565 139 PANTHER BLUE COPPER PROTEIN 30 132 IPR039391 GO:0009055
Seca12g06565 139 Pfam Plastocyanin-like domain 46 124 IPR003245 GO:0009055
Seca12g06565 139 Gene3D - 30 139 IPR008972 -
Seca12g06565 139 ProSiteProfiles Phytocyanin domain profile. 31 133 IPR003245 GO:0009055
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca12g06565 Seca-Chr12 157785459 157786493 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06565 15 131 Phytocyanin Superfamily AT4G31840 38.136 2.52e-25 93.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06565 - - gmx:102660389 175.252