Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06560 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTGAGGTTTATCCACCAGGAAGCTGAGGAAAAAGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATCGAGAAGCTGCAGTTGGTCGAAGCCGAGAAGAAGAAGATCAGGCAAGAGTACGAGCGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAAATTGAGTACTCAATGCAGCTGAATGCTTCTCGGATCAAAGTTCTTCAGGCTCAAGATGACGTGGTTAATTCCATGAAAGATGCTGCATCCAAGGAACTTTTGAATGTTAGCCATCATCATCATCAATACAAACACCTTTTGAAAGATCTCATTGTTCAGAGTTTGCTAAGACTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAACATGACTTGCATTTGGTAGAGCATGTGCTGGATTCTGCTGCACAGGAGTATGCTGATAAAGCAAATGTTCATCCACCAGAGATCATTGTTGACAAAAATGTCTATCTTCCACCTGCACCCAGCCATCACAATACACATGATCCCTACTGGTAA 561 0.4332 MNDADVSKQIQQMVRFIHQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKDAASKELLNVSHHHHQYKHLLKDLIVQSLLRLKEPSVLLRCRKHDLHLVEHVLDSAAQEYADKANVHPPEIIVDKNVYLPPAPSHHNTHDPYW. 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06560 186 Gene3D - 91 178 IPR038495 -
Seca12g06560 186 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 181 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca12g06560 186 SUPERFAMILY V-type ATPase subunit E-like 87 161 - -
Seca12g06560 186 Gene3D - 1 62 - -
Seca12g06560 186 Coils Coil 38 61 - -
Seca12g06560 186 Pfam ATP synthase (E/31 kDa) subunit 16 172 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06560 Seca-Chr12 157719530 157723230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06560 1 186 Primary Pumps ATPases(2) AT1G64200 75.000 3.87e-101 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06560 K02150 - gmx:100500452 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06560 12 157719530 157723230 Seca12g06560 12 157719530 157723230 ECH