Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06553 ATGGATGTGAGGTTCCAGAACTTGGGATTCCCTGTTAATAATTCTGCAAATGCATTCAAGATTTTGAGCAATTCTATGCAAGTTGAAGGAAGTGCAGCTGACTATTATGGTACAGATACCGTCTTACGACTTGATTCCCCTGGTTCTTCAATTCCCTCCTATAAGCCCTCCCCTAAGGGAATAAAAAGGAAGTGGGATTTAATTGATGGATGTATGGGTCAGAGTGTTGGCTCTTCTTTGTCTCTTGGGCTTGGACGTTCAACAAGTTCCTCAGACAGCAAGGGGAGTTCAGCTGTTGCTTGCACTGCTATGTCTTCAGGCAAAGATATTGATGAGGAATCATCGATGGATATTGATCTGGACTTCACCCTCCATATTGGGTGTGATAAGGTGCAGAGCCTGAAGAAACCTGCTAGTTCAAATTTGAAGACAATGGAATTGCAACCAAAGTTTGATTTGGAGTTGAGCCTTTCAACTGGGCCCTGTGAGTCAGATATTACAAGTGTTCATCTAAGTCCGTCACCACTTCAATTGAATAGGGAGATGCCATTAGTATTCAGTGGGGCTCAAAATACAGATGAGGGATCAACATCATGCAGTTGGAAGCCAGGGATTGTTTTGCCATCTTCAAAGACACCATTAAATACAGGCACTAGTTTCCCTCTAAATCAGGCTTCAAAGCAATTTGATCATAGTCCCATTGTTCTGGACCTCACCTCAACCATACCAAAAAGTTCAGTCACCTGTACTTCCGGGCTAACACAGCAGCAACAGCCAGTACAACGCCACAGTAGTTCTAAGATATGTCAAGTTGAGGGATGTGGAAAGGGAGCCAGAGGTGCCTCTGGACGATGTATATCTCATGGTGGTGGTAGGAGGTGTCAGAAACCTGGCTGCCACAAAGGAGCCGAGGGTCGTACAGTGTACTGCAAGGCCCATGGAGGTGGCAGGCGATGTGAATACCTTGGTTGCACAAAGAGTGCAGAAGGACGCACAGATTTCTGTATTGCCCATGGTGGTGGGCGGAGATGCAGTCATGAAGGTTGTACCCGAGCTGCCAGAGGGAAATCTGGATTGTGTATCCGGCATGGTGGTGGCAAGAGGTGCCAGAGGGAAAATTGCACCAAGAGTGCAGAAGGCCTATCAGGTCTTTGCATCTCACATGGTGGAGGGCATCGATGCCAAGCTCCTGGATGTTCAAAAGGGGCACAGGGGAGCACCATGTTTTGCAAAGCACATGGTGGGGGGAAACGTTGTACAGCACCAGGTTGCACCAAGGGTGCTGAGGGGAGCACCCCCTTTTGCAAGGGTCATGGTGGAGGAAAACGCTGTACATTCCAGGGTGGGGGAGTTTGCACTAAAAGTGTTCATGGAGGTACCAACTTCTGTGTGGCCCATGGGGGTGGAAAGAGGTGTGCTGTACCAGGTTGCACAAAGAGTGCTAGAGGAAGGACTGATCATTGTGTCCGCCATGGGGGAGGTAAGAGATGCAAGTTTGAAGGGTGTGGAAAGAGTGCACAAGGAAGCACTGACTTTTGCAAGGCACATGGGGGAGGCAAGAGATGCTCTTGGGGCCATCCCGGGTCAGAATATAGCACCCAACCTGATGGTCCTTGTAATTCATTTGCAAGGGGGAAAACTGGTCTGTGCGCACTTCATAGTGGATTAGTGCATGATAAGAGGGTTCATGGAGGGGTTTCATTGGGATCTGTTGTTCAGGATCCTCGTTCTAGCAAACCAAATGAACTAAAGCAGGTACTTGTTGACAAAGACATGGAAATGGCTATGATGAAAATAGGGAGTAGCCTGGGCACTGCTGGTCCAAGAACTTGTTCTGACTTTAAACAATATGAAGTTGCAAGTGCTCGTGTCTCAGCTGAGGAAGGTGGTCACATGCCAATGTCAGTTGCTGTTCCTGAAGGCAGGGTGCACGGTGGAAGTCTGTTGGCAATGCTGACGGGGAGTTCTGGCCGTGGCTCAAGCAGCGGGAGAGGTCTAGTTAGTGGTGACCCATCTGAGCCAATCAAAGGTTATGTCATGCCCCAGAGTTGGATTTAA 2058 0.4849 MDVRFQNLGFPVNNSANAFKILSNSMQVEGSAADYYGTDTVLRLDSPGSSIPSYKPSPKGIKRKWDLIDGCMGQSVGSSLSLGLGRSTSSSDSKGSSAVACTAMSSGKDIDEESSMDIDLDFTLHIGCDKVQSLKKPASSNLKTMELQPKFDLELSLSTGPCESDITSVHLSPSPLQLNREMPLVFSGAQNTDEGSTSCSWKPGIVLPSSKTPLNTGTSFPLNQASKQFDHSPIVLDLTSTIPKSSVTCTSGLTQQQQPVQRHSSSKICQVEGCGKGARGASGRCISHGGGRRCQKPGCHKGAEGRTVYCKAHGGGRRCEYLGCTKSAEGRTDFCIAHGGGRRCSHEGCTRAARGKSGLCIRHGGGKRCQRENCTKSAEGLSGLCISHGGGHRCQAPGCSKGAQGSTMFCKAHGGGKRCTAPGCTKGAEGSTPFCKGHGGGKRCTFQGGGVCTKSVHGGTNFCVAHGGGKRCAVPGCTKSARGRTDHCVRHGGGKRCKFEGCGKSAQGSTDFCKAHGGGKRCSWGHPGSEYSTQPDGPCNSFARGKTGLCALHSGLVHDKRVHGGVSLGSVVQDPRSSKPNELKQVLVDKDMEMAMMKIGSSLGTAGPRTCSDFKQYEVASARVSAEEGGHMPMSVAVPEGRVHGGSLLAMLTGSSGRGSSSGRGLVSGDPSEPIKGYVMPQSWI. 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06553 685 PANTHER EMB|CAB89363.1 262 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06553 Seca-Chr12 157623095 157627679 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06553 394 555 WRKY Transcription Factor Family AT4G12020 54.938 5.29e-48 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06553 - - gmx:100776565 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g06553 12 157623095 157627679 Seca12g06553 12 157623095 157627679 ECH
Seca12g06553 12 157623095 157627679 Seca12g06553 12 157623095 157627679 PCT