Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g06552 | ATGGGCAACTGCAACAGCGGCGGCGCCGCCACCTATTCCGGCGAGCCTCCCCAGCGCAACGGCCCCACTGTCCTCCCTACCAATTCCAACCCCTCACCCCCTCCCCCACTCCCGAAACCACAACCACCCCTCTCCTCCTCCCTCGGCCGCGTTCTCGGTCGCCCCATGGAGGACGTTCGCTCTATCTACGTCTTCGGCCGCGAGCTTGGTCGAGGCCAATTCGGCGTCACCTACTTGGTCACACACAAAGTGACGAAGGAGCAATTCGCCTGCAAATCCATCGCCACCCGCAAACTCATCAACCGCGACGACATCGACGACGTTCGCCGTGAGGTCCAGATCATGCACCACCTCACCGGCCACCGTAACATTGTGGAGCTCAAGGGTGCCTACGAGGATCGACACTCCGTTAACCTCATCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACAGGATCATTGCCAAGGGTCACTACTCCGAGCGCGCCGCCGCTAACTCGTGCCGCCAGATCGTGACGGTGGTTCATAACTGTCACTCCATGGGAGTCATGCATAGGGACTTGAAGCCTGAGAATTTCTTGTTGCTCAGCAATGACGAGAACTCACCTCTTAAGGCCACGGATTTTGGTCTCTCTGTGTTTTTTAAGCCAGGAGATGTGTTTAAAGATCTTGTTGGGAGTGCCTACTATGTTGCTCCTGAGGTGCTGCGTAGAAGTTATGGGCCTGAAGCTGATATTTGGAGTGCTGGGGTTATATTATACATTCTGCTTTCTGGTGTCCCTCCCTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTATTCTTCGTGGGCATATTGATTTCGTATCAGATCCTTGGCCTTCCATATCAAGTAGTGCCAAAGATCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTTCAGCAGCTGAAGTACTTAATCATCCTTGGATGAGAGTAGATGGAGATGCATCTGACAAGCCTCTTGACATTGCTGTTTTAACCAGAATGAAACAATTCCGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAGATTATTGGTTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCTAAACTGGGTAGCAAACTATCCGAGTCTGAAGTAAGACAGTTGATGGAAGCGGCAGATGTAGATGGAAACGGAACCATTGATTATATTGAATTTATAACCGCTACCATGCATATGAATAGAGTGGAAAGAGAGGATCACCTATATAAAGCCTTTGAATATTTCGACCAAGATAAGAGCGGGTACATCACAACAGAAGAGTTGAAATTTGCCCTTAAGAAGTATAATATGGGTGATGAGAAGACAATAAAGGAGATCATTGCCGAAGTTGATACAGACAATGATGGAAGAATTAACTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATAACCCACAGACGTCGCAAATAA | 1542 | 0.4857 | MGNCNSGGAATYSGEPPQRNGPTVLPTNSNPSPPPPLPKPQPPLSSSLGRVLGRPMEDVRSIYVFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLINRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDRHSVNLIMELCAGGELFDRIIAKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLSNDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFDAILRGHIDFVSDPWPSISSSAKDLVKKMLRADPKERLSAAEVLNHPWMRVDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRVEREDHLYKAFEYFDQDKSGYITTEELKFALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITHRRRK. | 514 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g06552 | 513 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 63 | 496 | - | - | |
Seca12g06552 | 513 | SUPERFAMILY | Protein kinase-like (PK-like) | 63 | 322 | IPR011009 | - | |
Seca12g06552 | 513 | SMART | serkin_6 | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g06552 | 513 | CDD | STKc_CAMK | 63 | 320 | - | - | |
Seca12g06552 | 513 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Seca12g06552 | 513 | ProSitePatterns | EF-hand calcium-binding domain. | 377 | 389 | IPR018247 | - | |
Seca12g06552 | 513 | SUPERFAMILY | EF-hand | 360 | 501 | IPR011992 | - | |
Seca12g06552 | 513 | ProSitePatterns | EF-hand calcium-binding domain. | 484 | 496 | IPR018247 | - | |
Seca12g06552 | 513 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Seca12g06552 | 513 | Pfam | EF-hand domain pair | 439 | 501 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | Pfam | EF-hand domain pair | 369 | 429 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | FunFam | Calcium-dependent protein kinase 1 | 329 | 504 | - | - | |
Seca12g06552 | 513 | ProSiteProfiles | Protein kinase domain profile. | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g06552 | 513 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 436 | 470 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | Gene3D | Transferase(Phosphotransferase) domain 1 | 149 | 328 | - | - | |
Seca12g06552 | 513 | Pfam | Protein kinase domain | 63 | 321 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g06552 | 513 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 364 | 399 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
Seca12g06552 | 513 | FunFam | Calcium-dependent protein kinase 1 | 65 | 148 | - | - | |
Seca12g06552 | 513 | FunFam | calcium-dependent protein kinase 1 | 149 | 328 | - | - | |
Seca12g06552 | 513 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 148 | - | - | |
Seca12g06552 | 513 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 183 | 195 | IPR008271 | GO:0004672|GO:0006468 | |
Seca12g06552 | 513 | MobiDBLite | consensus disorder prediction | 27 | 43 | - | - | |
Seca12g06552 | 513 | ProSitePatterns | EF-hand calcium-binding domain. | 413 | 425 | IPR018247 | - | |
Seca12g06552 | 513 | SMART | efh_1 | 440 | 468 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | SMART | efh_1 | 475 | 503 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | SMART | efh_1 | 368 | 396 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | SMART | efh_1 | 404 | 432 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 400 | 435 | IPR002048 | GO:0005509 | |
Seca12g06552 | 513 | Gene3D | - | 329 | 506 | - | - | |
Seca12g06552 | 513 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 471 | 506 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g06552 | Seca-Chr12 | 157617045 | 157621989 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g06552 | 49 | 513 | EF-hand Containing Proteins | AT4G23650 | 81.075 | 0.0 | 813 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca12g06552 | Pkinase | 3e-73 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g06552 | K13412 | - | gmx:100777096 | 919.457 |