Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06528 ATGGAATTAAAGAGGCACAAGACTAATTGCTCAGATAATTATGCATGGACTGATTACATGTCACTTCCATTTACTCAAAATGTCATTAGCGAAACTCTGAGAATGGCAAATATTGTCAATGGCATTTGGAGGAAAGCAGTCAAAGACGTAGAAATTAAAGGGTACCTAATTCCAAAGGACTGGTGTGTTATGGCATCTCTTACCTCTGTTCACATGGACGCCAACAATTATGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATAGGAGCTGTGGGTAGTAACAACTGCTTTACCCCATTTGGCGGTGGACCTAGACTATGCCCTGGGTTAGAACTCTCTATTTTCCTTCACCATCTTGTTACTACCTACAGGTAA 384 0.4036 MELKRHKTNCSDNYAWTDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDANNYENPFKFDPWRWEKIGAVGSNNCFTPFGGGPRLCPGLELSIFLHHLVTTYR. 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06528 127 Gene3D Cytochrome P450 2 127 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 PANTHER CYTOCHROME P450 26 2 126 - -
Seca12g06528 127 SUPERFAMILY Cytochrome P450 9 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 Pfam Cytochrome P450 12 119 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 PRINTS B-class P450 signature 27 38 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 PRINTS B-class P450 signature 101 110 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 PRINTS B-class P450 signature 44 71 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 PRINTS B-class P450 signature 72 87 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06528 127 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 103 112 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06528 Seca-Chr12 157313763 157316177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06528 1 127 Cytochrome P450 AT3G13730 56.818 1.43e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06528 K12637 - gmx:100799030 246.514