Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06498 ATGCACATGGATGCATCAACGGCTTTAATGTTCTTATCAGCGATAGCTGCCTATTTAATATGGTTCTCATTCATATCTCGACCACTCAGAGGTCCACGTGTCTGGCCCCTGTTTGGTAGCCTCCCGGGTCTCATCCAACACGCTAACCGCATGCACGACTGGATCGCGGACAATCTCCGCGCGTGTGGCGGCACGTACCAAACCTGCATATGCGCCATCCCCTTCCTCGCCAGAAAGCAGTGCCTCGTGACTGTCACGTGCGACCCAAAGAACCTCGAGCACATCCTCAAGCTCCGCTTCGACAACTACCCCAAAGGCCCAACCTGGCAATCGGTATTTCACGACCTTCTCGGGGATGGCATCTTCAACTCAGATGGTGACACGTGGCTGTTCCAGCGTAAGACTGCCGCACTGGAATTCACCACCCGCACCCTACGTCAAGCCATGGCTCGCTGGGTCAACCGAGCCATCAAGCACAGATTCTGTCCCATCTTAGCCACGGCTCAAGAAAACAAGACCCCAGTGGATCTCCAGGACCTCCTGCTTCGCCTCACTTTCGATAACATATGCGGCTTGGCTTTCGGTCAAGACCCACAGACTCTCGCTGTGGGACTTCCGGAGAATGGCTTCGCGCTTTCGTTTGACCGTGCCACGGAAGCTACCTTGCAGCGCTTCATTTTGCCGGAGATCGCTTGGAAGTTGAAGAAGTGGCTCCGGCTGGGAATGGAAGTGCGTCTGAGTCGAAGTCTCAAACACATAGACCAATACCTCTCCAACATCATCGAGAAGCGCAAACTAGAGCTACTGAACAAACAACAGAATGGCGGTGGCGGTGGCGGTGGGGGCCTCCATGACGACCTGCTGTCCCGGTTCATGAAGAAAAAGGAATCCTACTCGGACGAGTTCCTCCAACACGTGGCACTCAATTTCATCCTCGCAGGACGGGACACGTCATCGGTGGCTCTCAGCTGGTTCTTCTGGCTCTGTACCAAAAACCCAAGGGTGGAGGAAAACATCCTGATCGAGCTATGCACCGTTTTGATGGAGACACGTGGCGGGGATGTCTCTAAGTGGATAGAGGAGCCTCTGACTTTCGAGGAGGTTGACCGGTTGGTTTACCTCAAGGCTGCACTGTCCGAGACACTACGGCTTTACCCATCGGTGCCGGAGGACTCCAAGTACGTCGTGAAGGACGACGTTTTGCCGAGCGGGACGTTCGTTCCGGCAGGTTCGGCGGTGACGTATTCGATTTACTCGGTTGGGAGGATGAAGTTCATTTGGGGAGAGGACTGCCTTGAGTTCAAGCCAGAACGGTGGCTCTCCGCCGACGGTGACAAGATTCAGATGCAGGACTCTTACAAGTTTGTTTCGTTCAATGCGGGACCCAGGATTTGCCTGGGGAAGGACTTGGCCTACCTGCAGATGAAGAACATCGCCGCGTCGTTGCTGCTGCGCCACCGCCTAACGGTTGCGCCGGGACACCGTGTGGAGCAGAAGATGTCGTTGACGCTGTTCATGAAGTATGGGCTGAGGGTGAATGTGCACCCAAGGGATCTCAGGCCGGTGCTGGAAAAGGTTCGTGGTGTTGCTCAAAAGGGTTTTTGA 1605 0.5495 MHMDASTALMFLSAIAAYLIWFSFISRPLRGPRVWPLFGSLPGLIQHANRMHDWIADNLRACGGTYQTCICAIPFLARKQCLVTVTCDPKNLEHILKLRFDNYPKGPTWQSVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILATAQENKTPVDLQDLLLRLTFDNICGLAFGQDPQTLAVGLPENGFALSFDRATEATLQRFILPEIAWKLKKWLRLGMEVRLSRSLKHIDQYLSNIIEKRKLELLNKQQNGGGGGGGGLHDDLLSRFMKKKESYSDEFLQHVALNFILAGRDTSSVALSWFFWLCTKNPRVEENILIELCTVLMETRGGDVSKWIEEPLTFEEVDRLVYLKAALSETLRLYPSVPEDSKYVVKDDVLPSGTFVPAGSAVTYSIYSVGRMKFIWGEDCLEFKPERWLSADGDKIQMQDSYKFVSFNAGPRICLGKDLAYLQMKNIAASLLLRHRLTVAPGHRVEQKMSLTLFMKYGLRVNVHPRDLRPVLEKVRGVAQKGF. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06498 534 FunFam Cytochrome P450 23 520 - -
Seca12g06498 534 Pfam Cytochrome P450 30 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 SUPERFAMILY Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 Gene3D Cytochrome P450 26 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Seca12g06498 534 PANTHER CYTOCHROME P450 23 511 - -
Seca12g06498 534 CDD CYP86A 69 510 - -
Seca12g06498 534 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g06498 534 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06498 Seca-Chr12 157002723 157005304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06498 3 527 Cytochrome P450 AT2G45970 75.285 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06498 K15398 - gmx:121174913 944.88