Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06490 ATGATTGTTGATCAGAGAATTTTCAATAAAAATTATCAAGGTAAAGATGGGGCAGGCTATAAGCCTGACCAATTCTTGGATGCTTTACAGGTTTTATATTCAAACAAGGAGCTTTTTGTAAAACTTCTGCAAGATCCAAACTCTCTGTTAGCAAAACAGATTCATGAGTTGCAGAGTTCTCAAGTGACAGAACCATATCAGGCAAGGCAAAAAAGGATGAACAGATTGAATAAATCTCAAAACAGTAATGCTAGAAAAAGTGTAAAAAATTTCAATTCCTCTGATAGATATCATTCAAGTTGTGAGCCTCAGTCCTCAGAAAGAATAGTAGTTTTGAAGCCTAGCACAACTAGCTGTGACTGTCCTAGGCCTCACTCTTCTAGTAGCTTCAGTCACAATGCTCAAAATATCAAGCCTTCAAATTTTCCTTTTGGTCGTATAAAGAGAAAGTTAAGGCATGTCATGAGTGAAATGAGTAAAGATCAACAGCAGCGGAGGACTGCTGCTGGAGTGCCATGTGAATTTCCTTGCGGTGGTAAAGAAGTAAAAGAATTGGAAATTGCTGGAAGAAATTCACCAATTAACAGGTTGAAAAATTCTGAGTCATGTATGGGACAGGAAGCTGCTTCATTTGGTGAAAGTTGCAGTAACAACACAAATAACACTTCACTAAGCCCTTCTGAGCAAAACACATTGAACATACATGATGAAGATAACAAAAGTCCATCTCAGATGTTAAACTGTGAAATTGAGGAATGTAAACAGTGCACAAACTCTCTAGTCAGAACAATTCCTCTTCCTGACACTGAAAGGATGATAGATCATAACAACGATCAAATGGTCCTCAGAACCAAGTTGGGGCTTCAGAAAGATGAGAAAAATTATTCCTTTAGTTCTTCTGGTCAGAAATTCAAGGATCCATCAGTGGTCACTGTTAATACACTTGGTGATGAGTTGCAGCTTTTTGGTGCAGATGTTAGTACAAGAAGGAGTTTTCCTTGCGACAATTTGCATGCACATTATGACATTCCTACAGATTGCGGATATACAAATGAAAGTCCTACTCAGAACTTTGACATCACAACTGGAGGACTTGGATCTTTTCTGGATTCACATCAAGAGATCCAGACTTTGTCCTTTTCATCAGATGCTGCTTCATCCTGTCAGAGAATAGAAGATGAAGATGATGTCACTAATCCTCCAATAGCCATCTTTCAACCAGATGAGTCACCAGTGCAAGTTAAACATGAAAAGTTTGAAGAAAACTATTTTGCAGACCTTATAAGATCCTCTTTGGATCCAATAAACAAGTTAACCTCTTCCAAGGACATGTTAGACTACTTCAGGGAAATTGTGCAGGCTTTTACCTTGAAATGGGATGAACTTACTATGAAGAGTGCTTCATCTGACCTATTGATGGATTCATCCACCTTTGATGAACTGAAGGGATTAACTGGCCCTAAAATCTTGCATGACTGTAGCATTGAAATTTTCATGAAGGTATACCAGAACTGTTGTTTCTCACCTCATCCAAATGTCGAAGCATATGTTGTAAAAAATGTTCTGGCTAAAGAGATTGCAGAACTGGTTAACTTGCACTTTCTCCCTCGTCCATCACCAATAACGTTGCAACAGCTTGTTGAAAAGGACTTAGCAAAACGTGGATCATGGCTAAATATCCAAGTTGATACAGAAGACATTGCAATAGAGATGGAGAAAGATATTCTGGAAAAACTGGTATTGGAAATAGCATCTGAGATGGATCATAAAGCACTTTGGTAG 1782 0.3822 MIVDQRIFNKNYQGKDGAGYKPDQFLDALQVLYSNKELFVKLLQDPNSLLAKQIHELQSSQVTEPYQARQKRMNRLNKSQNSNARKSVKNFNSSDRYHSSCEPQSSERIVVLKPSTTSCDCPRPHSSSSFSHNAQNIKPSNFPFGRIKRKLRHVMSEMSKDQQQRRTAAGVPCEFPCGGKEVKELEIAGRNSPINRLKNSESCMGQEAASFGESCSNNTNNTSLSPSEQNTLNIHDEDNKSPSQMLNCEIEECKQCTNSLVRTIPLPDTERMIDHNNDQMVLRTKLGLQKDEKNYSFSSSGQKFKDPSVVTVNTLGDELQLFGADVSTRRSFPCDNLHAHYDIPTDCGYTNESPTQNFDITTGGLGSFLDSHQEIQTLSFSSDAASSCQRIEDEDDVTNPPIAIFQPDESPVQVKHEKFEENYFADLIRSSLDPINKLTSSKDMLDYFREIVQAFTLKWDELTMKSASSDLLMDSSTFDELKGLTGPKILHDCSIEIFMKVYQNCCFSPHPNVEAYVVKNVLAKEIAELVNLHFLPRPSPITLQQLVEKDLAKRGSWLNIQVDTEDIAIEMEKDILEKLVLEIASEMDHKALW. 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06490 593 Pfam Protein of unknown function (DUF3741) 5 48 IPR022212 -
Seca12g06490 593 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 395 587 - -
Seca12g06490 593 MobiDBLite consensus disorder prediction 216 240 - -
Seca12g06490 593 MobiDBLite consensus disorder prediction 72 140 - -
Seca12g06490 593 Pfam Domain of unknown function (DUF4378) 446 582 IPR025486 -
Seca12g06490 593 MobiDBLite consensus disorder prediction 72 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06490 Seca-Chr12 156940577 156945792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06490 395 585 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 28.358 2.26e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06490 - - gmx:100813885 648.662