Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06485 ATGCAGTGGGAACAGGAGGGAGGGGGAAAAGGGGGAACTGACAACTTAAATGGGTTTCCTTGGGTAGGTGTGAACCAAAGAGAAGCTTTAGGAGGCATACATGAAGGCAGCCAGCTTGCATCTCTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATTTGCCTTTAGAAACTTCAGAGGAGGAATTGAGGGCATGGTTGAGGGATGGATCTGTATTATGCAGCATTTTTGACAAGCTGGTTCCTGGTTCAGTGGAGGGAAGTGGTTCTTTGAATGGACCAGTCAGTGTTAAAAGGTTTCTGTCAGCTTTGGATGAATTGGGTTTGCCAGGATTTGAATTGTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCAGTGCCTTGAGACTCTGAAATATCATTTTGCTTACAATGCTGCACGAGAAAATGTCCAAAGTTGTACCAGAAAGAGGTGGGACCAATCGAATATAACATCCCTAGAGGAAACTGATTATTGCCTCAAGGATGCTTCAAAATTCAAACATGCTGTTGATGGTTCTGTTGTATCAGATGAAATTGCTTCTATAGATCATATTGGATTGAAGTCTAATGAACTGTTCCAGTTGAAGCGAGGATTGCACATGGATCTTTCAGATGCTAAACTTAGTGAATTATTAAAATCAAACAATTTGGATAATGTCTCAACTCAATTGCTTTTTAACATAGGAAACGGGATCCTAAGTGAGATCTTTGAAAGGAAGAATGGAGATGTCCCTCAAGGTCAGCGTGCAGCATGCTTATTGAGGAAAATATTGCAAGTAATTGAATTGCGCTTTTCAAATCAAGCAGAGAGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAAACAAGAATAAATGCACTTGAAACCCTGGCGGTAGGAACAACTGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAGTTGAAGTTTGCTTTGCAGCTTGAACAAGCTAAATTTGAGGAGAAGAAGAAACTTGAAGAGGAGGATTTTTCTCGATTAAAGAAAGACAAAGTTCGTTATGAAATTGAAATTTCTGAATTGAAGCAAGATTTAGAAATGGCCAAAAGAGCACATGAAGAACATGTTTCACAGTTAGAATTACAAGCTACTGAATCTAAAGCTGAATATGAGAAGAGAACAGTGGAACTTAAGCGTCATCTTGCTGATGCAAGGAAGCAAGTGAAGGAGCTGGAGGCATTTTCAGAATCCAGATCTTTGAATTGGAAGAATAAAGAGCATACCTATCGGAGTTTTGTAAATGACCAATTTAAGGCTTTCCAGGAATTGAGAGCTTCAATGAAGTCCGTAAAAAATGAGGTGATAAAAACAAAAAGAAGCTACTTGGAGGAATTCAAGTACTTTGGAATCAAGCTCAAAGGTTTAGCTGAGGCTGCCGAAAATTATCATGTAGTTCTAACAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATAAGGGTATATTGTCGAATTAGACCATTTCTTTCGGGGCAAAGTCAAAGTCATACAACAATTGAGTTTGTTGGTGATGATGGAGAACTAATTGTTAGCAATCCTCTCAAACAAGGAAAAGAAAATCGCAGGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAGCAAGTCAAGAGGAAGTATTCATAGACACTCAACCACTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAGACTGGCTCAGGAAAGACATATACAATGAGTGGACCTAGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGACCTTTTCCATATCTCCCAAAGTAGGAGAAGCTCTACTGAATATGAAGTTGCAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTATTATCAAGCAACGGTCCTCAAAAGAGACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAACTATGTATTCTGTGAATTCAATGACAGATGTCCTCGAGTTAATGAATACTGGGTTGATGAATCGAGCAACTAGTGCCACAGCCTTAAATGAAAGAAGTAGTAGATCACACAGTGTTCTCTCTGTACATGTTCGAGGAACTGAATTGAAGACCAAAACTTTGTTGCGTGGATGTCTGCATCTTGTAGATCTCGCAGGAAGTGAAAGAGTGGATCGTTCCGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAGCATATAAACAAATCATTATCCGCACTTGGAGATGTGATATCTGCTCTAGCTCAAAAGAGTTCTCATGTGCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCATTAGGTGGTCAAGCGAAAACCCTAATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTAGGAGCGGCTCGCAGCAATAGAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTAGCATCTCTCAAGGATGCAATTGCAAGAAAAGACGAAGAGAATGAGCGATTGCAGTCCCTCAAGGCTAATCACAATGGTTCAAAGCTTGGTGTAGTCTCACTAAGGCATGGGTCATCTTCTCCAAGGAGACATTCCATAGGGACACCCCGAAATAGCATGAGACTTCAAGGAGCAAAGAGCTTTGGAGTCAATGATAAAGCAACTTCTGACATGGATAACTGCTCAGAGTATAGTGATAAGAATTCAGAAGCTGGTTCTCATCAGTCAAATGATGATTTCAGGAATAAGTCCAGTTCCCTACGGTTGACATTAGCTAGAGAAGATATCAATCAAAATCTCAATGAGGACATGGAACTCTTAAAATTTGGAGATGCGGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTTGAGAAGGCAGCTGAAACTACACCAGCTAAGGAGAGAACAGCTGACAACCTTCTAGCTGAGAGCACAGAAAAGCCCATTATGCCATCCAAAATTCCCAAAGCTCCGCAAGTGCAGCAAGTGCAGCCAAAATTTCAGGCAAGAACTTCTAGGCTATCATTGAACAGAAGCTCCTCGAAGGCTTTGTCAAGTGTTAGAAAACCCACAGCCGGTAGCTCTTCTTCGGCGAAGCCTGTCAAACGATGGCAATAG 3288 0.4066 MQWEQEGGGKGGTDNLNGFPWVGVNQREALGGIHEGSQLASLVKWINAVLPNFNLPLETSEEELRAWLRDGSVLCSIFDKLVPGSVEGSGSLNGPVSVKRFLSALDELGLPGFELSDLEQGSMVPVLQCLETLKYHFAYNAARENVQSCTRKRWDQSNITSLEETDYCLKDASKFKHAVDGSVVSDEIASIDHIGLKSNELFQLKRGLHMDLSDAKLSELLKSNNLDNVSTQLLFNIGNGILSEIFERKNGDVPQGQRAACLLRKILQVIELRFSNQAESMKNQNNLFKAREGKYQTRINALETLAVGTTEENEVVTGWVQQLKFALQLEQAKFEEKKKLEEEDFSRLKKDKVRYEIEISELKQDLEMAKRAHEEHVSQLELQATESKAEYEKRTVELKRHLADARKQVKELEAFSESRSLNWKNKEHTYRSFVNDQFKAFQELRASMKSVKNEVIKTKRSYLEEFKYFGIKLKGLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRIRPFLSGQSQSHTTIEFVGDDGELIVSNPLKQGKENRRLFKFNKVFGQAASQEEVFIDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSDWGVNYRALHDLFHISQSRRSSTEYEVAVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDATMYSVNSMTDVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTELKTKTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVISALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNREGRDVRELMEQLASLKDAIARKDEENERLQSLKANHNGSKLGVVSLRHGSSSPRRHSIGTPRNSMRLQGAKSFGVNDKATSDMDNCSEYSDKNSEAGSHQSNDDFRNKSSSLRLTLAREDINQNLNEDMELLKFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAETTPAKERTADNLLAESTEKPIMPSKIPKAPQVQQVQPKFQARTSRLSLNRSSSKALSSVRKPTAGSSSSAKPVKRWQ. 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06485 1095 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 868 IPR027417 -
Seca12g06485 1095 ProSiteProfiles Kinesin motor domain profile. 503 831 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 MobiDBLite consensus disorder prediction 1016 1095 - -
Seca12g06485 1095 Coils Coil 845 875 - -
Seca12g06485 1095 Gene3D Kinesin motor domain 445 833 IPR036961 -
Seca12g06485 1095 Coils Coil 345 408 - -
Seca12g06485 1095 MobiDBLite consensus disorder prediction 1047 1095 - -
Seca12g06485 1095 SUPERFAMILY Calponin-homology domain, CH-domain 40 137 IPR036872 -
Seca12g06485 1095 Pfam Calponin homology (CH) domain 41 137 IPR001715 GO:0005515
Seca12g06485 1095 PANTHER KINESIN-LIKE PROTEIN KLP-3 44 374 IPR027640 GO:0003777|GO:0007018
Seca12g06485 1095 ProSiteProfiles Calponin homology (CH) domain profile. 36 138 IPR001715 GO:0005515
Seca12g06485 1095 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 445 833 - -
Seca12g06485 1095 MobiDBLite consensus disorder prediction 872 923 - -
Seca12g06485 1095 SMART ch_5 38 136 IPR001715 GO:0005515
Seca12g06485 1095 Gene3D - 35 141 IPR036872 -
Seca12g06485 1095 PRINTS Kinesin heavy chain signature 701 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 PRINTS Kinesin heavy chain signature 732 750 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 PRINTS Kinesin heavy chain signature 578 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 PRINTS Kinesin heavy chain signature 781 802 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 MobiDBLite consensus disorder prediction 871 948 - -
Seca12g06485 1095 Pfam Kinesin motor domain 509 829 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g06485 1095 SMART kinesin_4 501 839 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06485 Seca-Chr12 156894867 156903087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06485 471 831 Calmodulin-binding Proteins AT5G65930 41.758 1.20e-74 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g06485 K10406 - gmx:100812813 1759.96